Literature DB >> 16552477

Identification and characterization of Arabidopsis thaliana genes involved in xylem secondary cell walls.

Ryusuke Yokoyama1, Kazuhiko Nishitani.   

Abstract

The xylem of higher plants offers support to aerial portions of the plant body and serves as conduit for the translocation of water and nutrients. Terminal differentiation of xylem cells typically involves deposition of thick secondary cell walls. This is a dynamic cellular process accompanied by enhanced rates of cellulose deposition and the induction of synthesis of specific secondary-wall matrix polysaccharides and lignin. The secondary cell wall is essential for the function of conductive and supportive xylem tissues. Recently, significant progress has been made in identifying the genes responsible for xylem secondary cell wall formation. However, our present knowledge is still insufficient to account for the molecular processes by which this complex system operates. To acquire further information about xylem secondary cell walls, we initially focused our research effort on a set of genes specifically implicated in secondary cell wall formation, as well as on loss-of-function mutants. Results from two microarray screens identified several key candidate genes responsible for secondary cell wall formation. Reverse genetic analyses led to the identification of a glycine-rich protein involved in maintaining the stable structure of protoxylem, which is essential for the transport of water and nutrients. A combination of expression analyses and reverse genetics allows us to systematically identify new genes required for the development of physical properties of the xylem secondary wall.

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Year:  2006        PMID: 16552477     DOI: 10.1007/s10265-006-0261-7

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  38 in total

1.  Laccase down-regulation causes alterations in phenolic metabolism and cell wall structure in poplar.

Authors:  Philippe Ranocha; Matthieu Chabannes; Simon Chamayou; Saïda Danoun; Alain Jauneau; Alain-M Boudet; Deborah Goffner
Journal:  Plant Physiol       Date:  2002-05       Impact factor: 8.340

2.  Visualization by comprehensive microarray analysis of gene expression programs during transdifferentiation of mesophyll cells into xylem cells.

Authors:  Taku Demura; Gen Tashiro; Gorou Horiguchi; Naoki Kishimoto; Minoru Kubo; Naoko Matsuoka; Atsushi Minami; Miyo Nagata-Hiwatashi; Keiko Nakamura; Yoshimichi Okamura; Naomi Sassa; Shinsuke Suzuki; Junshi Yazaki; Shoshi Kikuchi; Hiroo Fukuda
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-18       Impact factor: 11.205

3.  Interactions among three distinct CesA proteins essential for cellulose synthesis.

Authors:  Neil G Taylor; Rhian M Howells; Alison K Huttly; Kate Vickers; Simon R Turner
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-21       Impact factor: 11.205

4.  A new structural element containing glycine-rich proteins and rhamnogalacturonan I in the protoxylem of seed plants.

Authors:  Ulrich Ryser; Martine Schorderet; Romain Guyot; Beat Keller
Journal:  J Cell Sci       Date:  2004-03-01       Impact factor: 5.285

5.  Structural cell-wall proteins in protoxylem development: evidence for a repair process mediated by a glycine-rich protein.

Authors:  U Ryser; M Schorderet; G F Zhao; D Studer; K Ruel; G Hauf; B Keller
Journal:  Plant J       Date:  1997-07       Impact factor: 6.417

6.  AtXTH27 plays an essential role in cell wall modification during the development of tracheary elements.

Authors:  Akihiro Matsui; Ryusuke Yokoyama; Motoaki Seki; Takuya Ito; Kazuo Shinozaki; Taku Takahashi; Yoshibumi Komeda; Kazuhiko Nishitani
Journal:  Plant J       Date:  2005-05       Impact factor: 6.417

7.  Carbohydrate-active enzymes involved in the secondary cell wall biogenesis in hybrid aspen.

Authors:  Henrik Aspeborg; Jarmo Schrader; Pedro M Coutinho; Mark Stam; Asa Kallas; Soraya Djerbi; Peter Nilsson; Stuart Denman; Bahram Amini; Fredrik Sterky; Emma Master; Göran Sandberg; Ewa Mellerowicz; Björn Sundberg; Bernard Henrissat; Tuula T Teeri
Journal:  Plant Physiol       Date:  2005-02-25       Impact factor: 8.340

Review 8.  Genomic basis for cell-wall diversity in plants. A comparative approach to gene families in rice and Arabidopsis.

Authors:  Ryusuke Yokoyama; Kazuhiko Nishitani
Journal:  Plant Cell Physiol       Date:  2004-09       Impact factor: 4.927

9.  Two azuki bean XTH genes, VaXTH1 and VaXTH2, with similar tissue-specific expression profiles, are differently regulated by auxin.

Authors:  Takuma Nakamura; Ryusuke Yokoyama; Etsuko Tomita; Kazuhiko Nishitani
Journal:  Plant Cell Physiol       Date:  2003-01       Impact factor: 4.927

10.  The irregular xylem 2 mutant is an allele of korrigan that affects the secondary cell wall of Arabidopsis thaliana.

Authors:  Pio M J Szyjanowicz; Iain McKinnon; Neil G Taylor; John Gardiner; Mike C Jarvis; Simon R Turner
Journal:  Plant J       Date:  2004-03       Impact factor: 6.417

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  16 in total

1.  Mechanical load induces upregulation of transcripts for a set of genes implicated in secondary wall formation in the supporting tissue of Arabidopsis thaliana.

Authors:  Kento Koizumi; Ryusuke Yokoyama; Kazuhiko Nishitani
Journal:  J Plant Res       Date:  2009-07-07       Impact factor: 2.629

2.  Demethylesterification of the primary wall by PECTIN METHYLESTERASE35 provides mechanical support to the Arabidopsis stem.

Authors:  Shoko Hongo; Kaori Sato; Ryusuke Yokoyama; Kazuhiko Nishitani
Journal:  Plant Cell       Date:  2012-06-12       Impact factor: 11.277

Review 3.  Functional diversity of the plant glycine-rich proteins superfamily.

Authors:  Amanda Mangeon; Ricardo Magrani Junqueira; Gilberto Sachetto-Martins
Journal:  Plant Signal Behav       Date:  2010-02-14

4.  Ectopic expression of SOD and APX genes in Arabidopsis alters metabolic pools and genes related to secondary cell wall cellulose biosynthesis and improve salt tolerance.

Authors:  Amrina Shafi; Tejpal Gill; Insha Zahoor; Paramvir Singh Ahuja; Yelam Sreenivasulu; Sanjay Kumar; Anil Kumar Singh
Journal:  Mol Biol Rep       Date:  2019-01-31       Impact factor: 2.316

5.  Genome-wide transcriptome analysis of the transition from primary to secondary stem development in Populus trichocarpa.

Authors:  Palitha Dharmawardhana; Amy M Brunner; Steven H Strauss
Journal:  BMC Genomics       Date:  2010-03-04       Impact factor: 3.969

6.  Genome-wide gene expression profiling reveals conserved and novel molecular functions of the stigma in rice.

Authors:  Meina Li; Wenying Xu; Wenqiang Yang; Zhaosheng Kong; Yongbiao Xue
Journal:  Plant Physiol       Date:  2007-06-07       Impact factor: 8.340

7.  The xylem as battleground for plant hosts and vascular wilt pathogens.

Authors:  Koste A Yadeta; Bart P H J Thomma
Journal:  Front Plant Sci       Date:  2013-04-23       Impact factor: 5.753

8.  Overexpression of a peroxidase gene (AtPrx64) of Arabidopsis thaliana in tobacco improves plant's tolerance to aluminum stress.

Authors:  Yuanshuang Wu; Zhili Yang; Jingyi How; Huini Xu; Limei Chen; Kunzhi Li
Journal:  Plant Mol Biol       Date:  2017-08-16       Impact factor: 4.076

9.  Towards uncovering the roles of switchgrass peroxidases in plant processes.

Authors:  Aaron J Saathoff; Teresa Donze; Nathan A Palmer; Jeff Bradshaw; Tiffany Heng-Moss; Paul Twigg; Christian M Tobias; Mark Lagrimini; Gautam Sarath
Journal:  Front Plant Sci       Date:  2013-06-19       Impact factor: 5.753

10.  Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes.

Authors:  Zoran Minic; Elisabeth Jamet; Hélène San-Clemente; Sandra Pelletier; Jean-Pierre Renou; Christophe Rihouey; Denis P O Okinyo; Caroline Proux; Patrice Lerouge; Lise Jouanin
Journal:  BMC Plant Biol       Date:  2009-01-16       Impact factor: 4.215

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