Literature DB >> 16552417

Mobilizing the base of neuroscience data: the case of neuronal morphologies.

Giorgio A Ascoli1.   

Abstract

Despite the explosive growth of bioinformatics, data sharing has not yet become routine in neuroscience, possibly because of several broad-spanning issues, from data heterogeneity to privacy regulations. We present the case of neuronal morphology as an ideal example of shareable data. Drawing from recent experience, we argue that the tremendous research potential of existing (and largely unused) digital reconstructions should diffuse any reticence to sharing this type of data.

Mesh：

Year:  2006        PMID： 16552417     DOI： 10.1038/nrn1885

Source DB:  PubMed          Journal:  Nat Rev Neurosci        ISSN： 1471-003X            Impact factor:   34.870


  117 in total

1.  A scaling law derived from optimal dendritic wiring.

Authors:  Hermann Cuntz; Alexandre Mathy; Michael Häusser
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-19       Impact factor: 11.205

2.  Morphologically accurate reduced order modeling of spiking neurons.

Authors:  Anthony R Kellems; Saifon Chaturantabut; Danny C Sorensen; Steven J Cox
Journal:  J Comput Neurosci       Date:  2010-03-19       Impact factor: 1.621

Review 3.  Brain maps and connectivity representation.

Authors:  Alessandro Vercelli
Journal:  Neuroinformatics       Date:  2006

4.  The ups and downs of neuroscience shares.

Authors:  Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2006

5.  Low-dimensional, morphologically accurate models of subthreshold membrane potential.

Authors:  Anthony R Kellems; Derrick Roos; Nan Xiao; Steven J Cox
Journal:  J Comput Neurosci       Date:  2009-01-27       Impact factor: 1.621

Review 6.  New insights into the classification and nomenclature of cortical GABAergic interneurons.

Authors:  Javier DeFelipe; Pedro L López-Cruz; Ruth Benavides-Piccione; Concha Bielza; Pedro Larrañaga; Stewart Anderson; Andreas Burkhalter; Bruno Cauli; Alfonso Fairén; Dirk Feldmeyer; Gord Fishell; David Fitzpatrick; Tamás F Freund; Guillermo González-Burgos; Shaul Hestrin; Sean Hill; Patrick R Hof; Josh Huang; Edward G Jones; Yasuo Kawaguchi; Zoltán Kisvárday; Yoshiyuki Kubota; David A Lewis; Oscar Marín; Henry Markram; Chris J McBain; Hanno S Meyer; Hannah Monyer; Sacha B Nelson; Kathleen Rockland; Jean Rossier; John L R Rubenstein; Bernardo Rudy; Massimo Scanziani; Gordon M Shepherd; Chet C Sherwood; Jochen F Staiger; Gábor Tamás; Alex Thomson; Yun Wang; Rafael Yuste; Giorgio A Ascoli
Journal:  Nat Rev Neurosci       Date:  2013-02-06       Impact factor: 34.870

7.  The membrane response of hippocampal CA3b pyramidal neurons near rest: Heterogeneity of passive properties and the contribution of hyperpolarization-activated currents.

Authors:  P Hemond; M Migliore; G A Ascoli; D B Jaffe
Journal:  Neuroscience       Date:  2009-02-13       Impact factor: 3.590

Review 8.  Towards the automatic classification of neurons.

Authors:  Rubén Armañanzas; Giorgio A Ascoli
Journal:  Trends Neurosci       Date:  2015-03-09       Impact factor: 13.837

Review 9.  Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex.

Authors:  Giorgio A Ascoli; Lidia Alonso-Nanclares; Stewart A Anderson; German Barrionuevo; Ruth Benavides-Piccione; Andreas Burkhalter; György Buzsáki; Bruno Cauli; Javier Defelipe; Alfonso Fairén; Dirk Feldmeyer; Gord Fishell; Yves Fregnac; Tamas F Freund; Daniel Gardner; Esther P Gardner; Jesse H Goldberg; Moritz Helmstaedter; Shaul Hestrin; Fuyuki Karube; Zoltán F Kisvárday; Bertrand Lambolez; David A Lewis; Oscar Marin; Henry Markram; Alberto Muñoz; Adam Packer; Carl C H Petersen; Kathleen S Rockland; Jean Rossier; Bernardo Rudy; Peter Somogyi; Jochen F Staiger; Gabor Tamas; Alex M Thomson; Maria Toledo-Rodriguez; Yun Wang; David C West; Rafael Yuste
Journal:  Nat Rev Neurosci       Date:  2008-07       Impact factor: 34.870

Review 10.  Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience.

Authors:  Robert A McDougal; Thomas M Morse; Ted Carnevale; Luis Marenco; Rixin Wang; Michele Migliore; Perry L Miller; Gordon M Shepherd; Michael L Hines
Journal:  J Comput Neurosci       Date:  2016-09-15       Impact factor: 1.621
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.