Literature DB >> 16541749

[Development of Allergen Database for Food Safety (ADFS): an integrated database to search allergens and predict allergenicity].

Ryosuke Nakamura, Reiko Teshima, Kayoko Takagi, Jun-ichi Sawada.   

Abstract

Allergy has been one of the most common chronic health problems in recent years, and the introduction of recombinant proteins into foods and other products has raised public concern about the induction of allergy. Prediction of food allergenicity is very important but still unsatisfactory. By using an enormous amount of data produced by genomic, functional, and structural studies, bioinformatics can provide useful insights into allergenicity. We have developed a web server database system which is comprised of allergenic proteins for food safety and homology search tools, "Allergen Database for Food Safety (ADFS)". Since ADFS includes the sequences of known allergens and B-cell epitopes, a potential allergenicity of a novel protein in food should be detected by homology search. The database contains allergens classified into 8 categories (pollen, mite, animal, fungus, insect, food, latex, and others), together with the public database accession numbers of their genes, and their epitope and 3D-structure information. Users can easily search allergens with keywords and amino acid sequences through the graphical interfaces.

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Year:  2005        PMID: 16541749

Source DB:  PubMed          Journal:  Kokuritsu Iyakuhin Shokuhin Eisei Kenkyusho Hokoku        ISSN: 1343-4292


  6 in total

1.  Computational detection of allergenic proteins attains a new level of accuracy with in silico variable-length peptide extraction and machine learning.

Authors:  D Soeria-Atmadja; T Lundell; M G Gustafsson; U Hammerling
Journal:  Nucleic Acids Res       Date:  2006-08-23       Impact factor: 16.971

2.  PREAL: prediction of allergenic protein by maximum Relevance Minimum Redundancy (mRMR) feature selection.

Authors:  Jing Wang; Dabing Zhang; Jing Li
Journal:  BMC Syst Biol       Date:  2013-12-09

3.  AllerBase: a comprehensive allergen knowledgebase.

Authors:  Kiran Kadam; Rajiv Karbhal; V K Jayaraman; Sangeeta Sawant; Urmila Kulkarni-Kale
Journal:  Database (Oxford)       Date:  2017-01-01       Impact factor: 3.451

4.  Development and evaluation of novel salt-tolerant Eucalyptus trees by molecular breeding using an RNA-Binding-Protein gene derived from common ice plant (Mesembryanthemum crystallinum L.).

Authors:  Ngoc-Ha Thi Tran; Taichi Oguchi; Nobuhumi Akatsuka; Etsuko Matsunaga; Akiyoshi Kawaoka; Akiyo Yamada; Yoshihiro Ozeki; Kazuo N Watanabe; Akira Kikuchi
Journal:  Plant Biotechnol J       Date:  2018-10-12       Impact factor: 9.803

5.  Understanding buckwheat allergies for the management of allergic reactions in humans and animals.

Authors:  Rie Satoh; Erika Jensen-Jarolim; Reiko Teshima
Journal:  Breed Sci       Date:  2020-02-04       Impact factor: 2.086

Review 6.  Allergic Diseases: A Comprehensive Review on Risk Factors, Immunological Mechanisms, Link with COVID-19, Potential Treatments, and Role of Allergen Bioinformatics.

Authors:  Fahad M Aldakheel
Journal:  Int J Environ Res Public Health       Date:  2021-11-18       Impact factor: 3.390

  6 in total

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