Literature DB >> 16541253

The motor domains of ABC-transporters. What can structures tell us?

Christine Oswald1, I Barry Holland, Lutz Schmitt.   

Abstract

The transport of substrates across a cellular membrane is a vitally important biological function essential for cell survival. ATP-binding cassette (ABC) transporters constitute one of the largest subfamilies of membrane proteins, accomplishing this task. Mutations in genes encoding for ABC transporters cause different diseases, for example, Adrenoleukodystrophy, Stargardt disease or Cystic Fibrosis. Furthermore, some ABC transporters are responsible for multidrug resistance, presenting a major obstacle in modern cancer chemotherapy. In order to translocate the enormous variety of substrates, ranging from ions, nutrients, small peptides to large toxins, different ABC-transporters utilize the energy gained from ATP binding and hydrolysis. The ATP binding cassette, also called the motor domain of ABC transporters, is highly conserved among all ABC transporters. The ability to purify this domain rather easily presents a perfect possibility to investigate the mechanism of ATP hydrolysis, thus providing us with a detailed picture of this process. Recently, many crystal structures of the ATP-binding domain and the full-length structures of two ABC transporters have been solved. Combining these structural data, we have now the opportunity to analyze the hydrolysis event on a molecular level. This review provides an overview of the structural investigations of the ATP-binding domains, highlighting molecular changes upon ATP binding and hydrolysis.

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Year:  2006        PMID: 16541253     DOI: 10.1007/s00210-005-0031-4

Source DB:  PubMed          Journal:  Naunyn Schmiedebergs Arch Pharmacol        ISSN: 0028-1298            Impact factor:   3.000


  86 in total

1.  Crystal structure of the nucleotide-binding domain of the ABC-transporter haemolysin B: identification of a variable region within ABC helical domains.

Authors:  Lutz Schmitt; Houssain Benabdelhak; Mark A Blight; I Barry Holland; Milton T Stubbs
Journal:  J Mol Biol       Date:  2003-07-04       Impact factor: 5.469

Review 2.  ATP-dependent bacterial transporters and cystic fibrosis: analogy between channels and transporters.

Authors:  G F Ames; H Lecar
Journal:  FASEB J       Date:  1992-06       Impact factor: 5.191

Review 3.  Type 1 protein secretion in bacteria, the ABC-transporter dependent pathway (review).

Authors:  I Barry Holland; Lutz Schmitt; Joanne Young
Journal:  Mol Membr Biol       Date:  2005 Jan-Apr       Impact factor: 2.857

4.  The proteins encoded by the rbs operon of Escherichia coli: II. Use of chimeric protein constructs to isolate and characterize RbsC.

Authors:  J Zaitseva; H Zhang; R A Binnie; M Hermodson
Journal:  Protein Sci       Date:  1996-06       Impact factor: 6.725

5.  Overexpression of the ATP-binding cassette half-transporter, ABCG2 (Mxr/BCrp/ABCP1), in flavopiridol-resistant human breast cancer cells.

Authors:  R W Robey; W Y Medina-Pérez; K Nishiyama; T Lahusen; K Miyake; T Litman; A M Senderowicz; D D Ross; S E Bates
Journal:  Clin Cancer Res       Date:  2001-01       Impact factor: 12.531

6.  The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism.

Authors:  Kaspar P Locher; Allen T Lee; Douglas C Rees
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

7.  Subunit interactions in ABC transporters: a conserved sequence in hydrophobic membrane proteins of periplasmic permeases defines an important site of interaction with the ATPase subunits.

Authors:  M Mourez; M Hofnung; E Dassa
Journal:  EMBO J       Date:  1997-06-02       Impact factor: 11.598

Review 8.  Conserved domains in DNA repair proteins and evolution of repair systems.

Authors:  L Aravind; D R Walker; E V Koonin
Journal:  Nucleic Acids Res       Date:  1999-03-01       Impact factor: 16.971

9.  Synergy between conserved ABC signature Ser residues in P-glycoprotein catalysis.

Authors:  Gregory Tombline; Lori Bartholomew; Khursheed Gimi; Grace A Tyndall; Alan E Senior
Journal:  J Biol Chem       Date:  2003-11-24       Impact factor: 5.157

10.  ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer.

Authors:  Paul C Smith; Nathan Karpowich; Linda Millen; Jonathan E Moody; Jane Rosen; Philip J Thomas; John F Hunt
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

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  50 in total

1.  Substrate transport activation is mediated through second periplasmic loop of transmembrane protein MalF in maltose transport complex of Escherichia coli.

Authors:  Tomas Jacso; Erwin Schneider; Bernd Rupp; Bernd Reif
Journal:  J Biol Chem       Date:  2012-03-26       Impact factor: 5.157

2.  A structural analysis of asymmetry required for catalytic activity of an ABC-ATPase domain dimer.

Authors:  Jelena Zaitseva; Christine Oswald; Thorsten Jumpertz; Stefan Jenewein; Alexander Wiedenmann; I Barry Holland; Lutz Schmitt
Journal:  EMBO J       Date:  2006-07-06       Impact factor: 11.598

3.  Flexibility in the ABC transporter MsbA: Alternating access with a twist.

Authors:  Andrew Ward; Christopher L Reyes; Jodie Yu; Christopher B Roth; Geoffrey Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-16       Impact factor: 11.205

4.  A multi-faceted world of transporters.

Authors:  Ernst Petzinger; Gerhard Burckhardt; Robert Tampé
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2006-03       Impact factor: 3.000

5.  Time-resolved Fourier transform infrared spectroscopy of the nucleotide-binding domain from the ATP-binding Cassette transporter MsbA: ATP hydrolysis is the rate-limiting step in the catalytic cycle.

Authors:  Falk Syberg; Yan Suveyzdis; Carsten Kötting; Klaus Gerwert; Eckhard Hofmann
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

6.  Hydrolysis at one of the two nucleotide-binding sites drives the dissociation of ATP-binding cassette nucleotide-binding domain dimers.

Authors:  Maria E Zoghbi; Guillermo A Altenberg
Journal:  J Biol Chem       Date:  2013-10-15       Impact factor: 5.157

7.  ATP-binding cassette transporter ABCA4: molecular properties and role in vision and macular degeneration.

Authors:  Robert S Molday
Journal:  J Bioenerg Biomembr       Date:  2007-12       Impact factor: 2.945

Review 8.  The role of the photoreceptor ABC transporter ABCA4 in lipid transport and Stargardt macular degeneration.

Authors:  Robert S Molday; Ming Zhong; Faraz Quazi
Journal:  Biochim Biophys Acta       Date:  2009-02-20

9.  Identification and expression analysis of genes involved in early ovary development in diploid gynogenetic hybrids of red crucian carp x common carp.

Authors:  Dong Liu; Shaojun Liu; Cuiping You; Lin Chen; Zhen Liu; Liangguo Liu; Jing Wang; Yun Liu
Journal:  Mar Biotechnol (NY)       Date:  2009-07-16       Impact factor: 3.619

10.  Functionally important ATP binding and hydrolysis sites in Escherichia coli MsbA.

Authors:  Kathryn M Westfahl; Jacqueline A Merten; Adam H Buchaklian; Candice S Klug
Journal:  Biochemistry       Date:  2008-12-30       Impact factor: 3.162

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