Literature DB >> 16540098

Inner ear proteomics: a fad or hear to stay.

Isolde Thalmann1.   

Abstract

Proteomics, the large-scale analysis of the structure and function of proteins, as well as of protein-protein interactions, has evolved into a major component of 'systems analysis'. This requires the integration of information from different sources and at multiple levels, and involves two distinct parameters, (1) high-throughput protein separation, identification, and characterization, and (2) the extension of the obtained analytical data for the determination of the physiological function. The inner ear poses exceptional challenges to the study of proteomics because of its minute size, poor accessibility, association with complex fluid spaces, and diversity of cell types. Various approaches to the study of proteomics of the inner ear are presented, and success stories, noteworthy failures and what lies ahead, will be discussed.

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Year:  2006        PMID: 16540098     DOI: 10.1016/j.brainres.2006.01.099

Source DB:  PubMed          Journal:  Brain Res        ISSN: 0006-8993            Impact factor:   3.252


  10 in total

1.  A protein interaction network for the large conductance Ca(2+)-activated K(+) channel in the mouse cochlea.

Authors:  Thandavarayan Kathiresan; Margaret Harvey; Sandra Orchard; Yoshihisa Sakai; Bernd Sokolowski
Journal:  Mol Cell Proteomics       Date:  2009-05-07       Impact factor: 5.911

2.  Identification of target proteins involved in cochlear otosclerosis.

Authors:  Céline Richard; Joni K Doherty; Jose N Fayad; Ana Cordero; Fred H Linthicum
Journal:  Otol Neurotol       Date:  2015-06       Impact factor: 2.311

3.  Bottom-up and shotgun proteomics to identify a comprehensive cochlear proteome.

Authors:  Lancia N F Darville; Bernd H A Sokolowski
Journal:  J Vis Exp       Date:  2014-03-07       Impact factor: 1.355

4.  A method for MS(E) differential proteomic analysis of archival formalin-fixed celloidin-embedded human inner ear tissue.

Authors:  Antti A Aarnisalo; Karin M Green; Jennifer O'Malley; Chadi Makary; Joe Adams; Saumil N Merchant; James E Evans
Journal:  Hear Res       Date:  2010-08-12       Impact factor: 3.208

Review 5.  Mouse models for human otitis media.

Authors:  Dennis R Trune; Qing Yin Zheng
Journal:  Brain Res       Date:  2009-03-06       Impact factor: 3.252

6.  In-depth proteomic analysis of mouse cochlear sensory epithelium by mass spectrometry.

Authors:  Lancia N F Darville; Bernd H A Sokolowski
Journal:  J Proteome Res       Date:  2013-06-26       Impact factor: 4.466

Review 7.  Auditory proteomics: methods, accomplishments and challenges.

Authors:  Samson Jamesdaniel; Richard Salvi; Donald Coling
Journal:  Brain Res       Date:  2009-02-24       Impact factor: 3.252

8.  The Transcriptomics to Proteomics of Hair Cell Regeneration: Looking for a Hair Cell in a Haystack.

Authors:  Michael E Smith; Gopinath Rajadinakaran
Journal:  Microarrays (Basel)       Date:  2013-07-25

9.  Isolation of sensory hair cell specific exosomes in human perilymph.

Authors:  Pei Zhuang; Suiching Phung; Athanasia Warnecke; Alexandra Arambula; Madeleine St Peter; Mei He; Hinrich Staecker
Journal:  Neurosci Lett       Date:  2021-10-04       Impact factor: 3.197

10.  Proteomic analysis of the organ of corti using nanoscale liquid chromatography coupled with tandem mass spectrometry.

Authors:  Hong Peng; Miao Liu; Jason Pecka; Kirk W Beisel; Shi-Jian Ding
Journal:  Int J Mol Sci       Date:  2012-07-02       Impact factor: 6.208

  10 in total

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