Literature DB >> 16536468

A structured chitosan-based platform for biomolecule attachment to solid surfaces: application to DNA microarray preparation.

Clarissa Consolandi1, Marco Severgnini, Bianca Castiglioni, Roberta Bordoni, Andrea Frosini, Cristina Battaglia, Luigi Rossi Bernardi, Gianluca De Bellis.   

Abstract

A structured chemical platform based on chitosan, an amine-rich polysaccharide, is presented as an alternative chemistry to functionalize solid support (in this case, glass slides) for grafting biomolecules. This approach has been adopted for generating arrays using amino-modified oligonucleotides with two different lengths (25-mer and 70-mer) for different purposes. Results using these chitosan-activated surfaces indicate high oligonucleotide loading capacity, good availability to hybridization against targets, and effectiveness in enzyme-mediated single nucleotide polymorphism (SNP) detection procedures by DNA polymerase and DNA ligase enzymes with low background. Universal arrays have been prepared and extensively used with excellent results in different applications. The chitosan-treated surfaces were also evaluated for their performance in a gene expression experiment.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16536468     DOI: 10.1021/bc050285a

Source DB:  PubMed          Journal:  Bioconjug Chem        ISSN: 1043-1802            Impact factor:   4.774


  8 in total

1.  Cyclooxygenase-2 silencing for the treatment of colitis: a combined in vivo strategy based on RNA interference and engineered Escherichia coli.

Authors:  Enzo Spisni; Maria C Valerii; Luigia De Fazio; Elena Cavazza; Francesca Borsetti; Annamaria Sgromo; Marco Candela; Manuela Centanni; Fernando Rizello; Antonio Strillacci
Journal:  Mol Ther       Date:  2014-11-13       Impact factor: 11.454

2.  New labelling technology for molecular probes applied to the ligation detection reaction-universal array system.

Authors:  Andrea Lauri; Stefania Chessa; Marta Raschetti; Bianca Castiglioni; Paola Mariani; Alexandre R Caetano
Journal:  Mol Biotechnol       Date:  2011-01       Impact factor: 2.695

3.  Development of a microarray-based tool to characterize vaginal bacterial fluctuations and application to a novel antibiotic treatment for bacterial vaginosis.

Authors:  Federica Cruciani; Elena Biagi; Marco Severgnini; Clarissa Consolandi; Fiorella Calanni; Gilbert Donders; Patrizia Brigidi; Beatrice Vitali
Journal:  Antimicrob Agents Chemother       Date:  2015-03-02       Impact factor: 5.191

4.  Longitudinal analysis of inflammation and microbiota dynamics in a model of mild chronic dextran sulfate sodium-induced colitis in mice.

Authors:  Luigia De Fazio; Elena Cavazza; Enzo Spisni; Antonio Strillacci; Manuela Centanni; Marco Candela; Chiara Praticò; Massimo Campieri; Chiara Ricci; Maria Chiara Valerii
Journal:  World J Gastroenterol       Date:  2014-02-28       Impact factor: 5.742

5.  High taxonomic level fingerprint of the human intestinal microbiota by ligase detection reaction--universal array approach.

Authors:  Marco Candela; Clarissa Consolandi; Marco Severgnini; Elena Biagi; Bianca Castiglioni; Beatrice Vitali; Gianluca De Bellis; Patrizia Brigidi
Journal:  BMC Microbiol       Date:  2010-04-19       Impact factor: 3.605

6.  A probiotics-containing biscuit modulates the intestinal microbiota in the elderly.

Authors:  S Rampelli; M Candela; M Severgnini; E Biagi; S Turroni; M Roselli; P Carnevali; L Donini; P Brigidi
Journal:  J Nutr Health Aging       Date:  2013-02       Impact factor: 4.075

7.  Unbalance of intestinal microbiota in atopic children.

Authors:  Marco Candela; Simone Rampelli; Silvia Turroni; Marco Severgnini; Clarissa Consolandi; Gianluca De Bellis; Riccardo Masetti; Giampaolo Ricci; Andrea Pession; Patrizia Brigidi
Journal:  BMC Microbiol       Date:  2012-06-06       Impact factor: 3.605

8.  Design and validation of a DNA-microarray for phylogenetic analysis of bacterial communities in different oral samples and dental implants.

Authors:  Carola Parolin; Barbara Giordani; Rogers Alberto Ñahui Palomino; Elena Biagi; Marco Severgnini; Clarissa Consolandi; Giada Caredda; Stefano Storelli; Laura Strohmenger; Beatrice Vitali
Journal:  Sci Rep       Date:  2017-07-24       Impact factor: 4.379

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.