Literature DB >> 16535418

Manganese-Dependent Cleavage of Nonphenolic Lignin Structures by Ceriporiopsis subvermispora in the Absence of Lignin Peroxidase.

K A Jensen, W Bao, S Kawai, E Srebotnik, K E Hammel.   

Abstract

Many ligninolytic fungi appear to lack lignin peroxidase (LiP), the enzyme generally thought to cleave the major, recalcitrant, nonphenolic structures in lignin. At least one such fungus, Ceriporiopsis subvermispora, is nevertheless able to degrade these nonphenolic structures. Experiments showed that wood block cultures and defined liquid medium cultures of C. subvermispora rapidly depolymerized and mineralized a (sup14)C-labeled, polyethylene glycol-linked, high-molecular-weight (beta)-O-4 lignin model compound (model I) that represents the major nonphenolic structure of lignin. The fungus cleaved model I between C(inf(alpha)) and C(inf(beta)) to release benzylic fragments, which were shown in isotope trapping experiments to be major products of model I metabolism. The C(inf(alpha))-C(inf(beta)) cleavage of (beta)-O-4 lignin structures to release benzylic fragments is characteristic of LiP catalysis, but assays of C. subvermispora liquid cultures that were metabolizing model I confirmed that the fungus produced no detectable LiP activity. Three results pointed, instead, to the participation of a different enzyme, manganese peroxidase (MnP), in the degradation of nonphenolic lignin structures by C. subvermispora. (i) The degradation of model I and of exhaustively methylated (nonphenolic), (sup14)C-labeled, synthetic lignin by the fungus in liquid cultures was almost completely inhibited when the Mn concentration of the medium was decreased from 35 (mu)M to approximately 5 (mu)M. (ii) The fungus degraded model I and methylated lignin significantly faster in the presence of Tween 80, a source of unsaturated fatty acids, than it did in the presence of Tween 20, which contains only saturated fatty acids. Previous work has shown that nonphenolic lignin structures are degraded during the MnP-mediated peroxidation of unsaturated lipids. (iii) In experiments with MnP, Mn(II), and unsaturated lipid in vitro, this system mimicked intact C. subvermispora cultures in that it cleaved nonphenolic (beta)-O-4 lignin model compounds between C(inf(alpha)) and C(inf(beta)) to release a benzylic fragment.

Entities:  

Year:  1996        PMID: 16535418      PMCID: PMC1388956          DOI: 10.1128/aem.62.10.3679-3686.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  25 in total

1.  Lip-like genes in Phanerochaete sordida and Ceriporiopsis subvermispora, white rot fungi with no detectable lignin peroxidase activity.

Authors:  S Rajakumar; J Gaskell; D Cullen; S Lobos; E Karahanian; R Vicuna
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

2.  Comparison of ligninase-I and peroxidase-M2 from the white-rot fungus Phanerochaete chrysosporium.

Authors:  A Paszczyński; V B Huynh; R Crawford
Journal:  Arch Biochem Biophys       Date:  1986-02-01       Impact factor: 4.013

Review 3.  Enzymatic "combustion": the microbial degradation of lignin.

Authors:  T K Kirk; R L Farrell
Journal:  Annu Rev Microbiol       Date:  1987       Impact factor: 15.500

4.  Efficient expression of a Phanerochaete chrysosporium manganese peroxidase gene in Aspergillus oryzae.

Authors:  P Stewart; R E Whitwam; P J Kersten; D Cullen; M Tien
Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

5.  Mn(II) oxidation is the principal function of the extracellular Mn-peroxidase from Phanerochaete chrysosporium.

Authors:  J K Glenn; L Akileswaran; M H Gold
Journal:  Arch Biochem Biophys       Date:  1986-12       Impact factor: 4.013

6.  New polymeric model substrates for the study of microbial ligninolysis.

Authors:  S Kawai; K A Jensen; W Bao; K E Hammel
Journal:  Appl Environ Microbiol       Date:  1995-09       Impact factor: 4.792

7.  Ubiquity of lignin-degrading peroxidases among various wood-degrading fungi.

Authors:  A B Orth; D J Royse; M Tien
Journal:  Appl Environ Microbiol       Date:  1993-12       Impact factor: 4.792

8.  Kinetic analysis of manganese peroxidase. The reaction with manganese complexes.

Authors:  I C Kuan; K A Johnson; M Tien
Journal:  J Biol Chem       Date:  1993-09-25       Impact factor: 5.157

9.  Oxidative degradation of non-phenolic lignin during lipid peroxidation by fungal manganese peroxidase.

Authors:  W Bao; Y Fukushima; K A Jensen; M A Moen; K E Hammel
Journal:  FEBS Lett       Date:  1994-11-14       Impact factor: 4.124

10.  Ligninolysis by a purified lignin peroxidase.

Authors:  K E Hammel; K A Jensen; M D Mozuch; L L Landucci; M Tien; E A Pease
Journal:  J Biol Chem       Date:  1993-06-15       Impact factor: 5.157

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  14 in total

1.  Production of manganese peroxidase and organic acids and mineralization of 14C-labelled lignin (14C-DHP) during solid-state fermentation of wheat straw with the white rot fungus nematoloma frowardii

Authors: 
Journal:  Appl Environ Microbiol       Date:  1999-05       Impact factor: 4.792

2.  Cloning and sequencing of two Ceriporiopsis subvermispora bicupin oxalate oxidase allelic isoforms: implications for the reaction specificity of oxalate oxidases and decarboxylases.

Authors:  Marta R Escutia; Laura Bowater; Anne Edwards; Andrew R Bottrill; Matthew R Burrell; Rubén Polanco; Rafael Vicuña; Stephen Bornemann
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

3.  Enzymatic Combustion of Aromatic and Aliphatic Compounds by Manganese Peroxidase from Nematoloma frowardii.

Authors:  M Hofrichter; K Scheibner; I Schneegass; W Fritsche
Journal:  Appl Environ Microbiol       Date:  1998-02       Impact factor: 4.792

4.  Lignin-degrading peroxidases from genome of selective ligninolytic fungus Ceriporiopsis subvermispora.

Authors:  Elena Fernández-Fueyo; Francisco J Ruiz-Dueñas; Yuta Miki; María Jesús Martínez; Kenneth E Hammel; Angel T Martínez
Journal:  J Biol Chem       Date:  2012-03-21       Impact factor: 5.157

5.  Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis.

Authors:  Elena Fernandez-Fueyo; Francisco J Ruiz-Dueñas; Patricia Ferreira; Dimitrios Floudas; David S Hibbett; Paulo Canessa; Luis F Larrondo; Tim Y James; Daniela Seelenfreund; Sergio Lobos; Rubén Polanco; Mario Tello; Yoichi Honda; Takahito Watanabe; Takashi Watanabe; Jae San Ryu; Ryu Jae San; Christian P Kubicek; Monika Schmoll; Jill Gaskell; Kenneth E Hammel; Franz J St John; Amber Vanden Wymelenberg; Grzegorz Sabat; Sandra Splinter BonDurant; Khajamohiddin Syed; Jagjit S Yadav; Harshavardhan Doddapaneni; Venkataramanan Subramanian; José L Lavín; José A Oguiza; Gumer Perez; Antonio G Pisabarro; Lucia Ramirez; Francisco Santoyo; Emma Master; Pedro M Coutinho; Bernard Henrissat; Vincent Lombard; Jon Karl Magnuson; Ursula Kües; Chiaki Hori; Kiyohiko Igarashi; Masahiro Samejima; Benjamin W Held; Kerrie W Barry; Kurt M LaButti; Alla Lapidus; Erika A Lindquist; Susan M Lucas; Robert Riley; Asaf A Salamov; Dirk Hoffmeister; Daniel Schwenk; Yitzhak Hadar; Oded Yarden; Ronald P de Vries; Ad Wiebenga; Jan Stenlid; Daniel Eastwood; Igor V Grigoriev; Randy M Berka; Robert A Blanchette; Phil Kersten; Angel T Martinez; Rafael Vicuna; Dan Cullen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-20       Impact factor: 11.205

6.  Conversion of milled pine wood by manganese peroxidase from Phlebia radiata.

Authors:  M Hofrichter; T Lundell; A Hatakka
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

7.  Production of new unsaturated lipids during wood decay by ligninolytic basidiomycetes.

Authors:  Ana Gutiérrez; José C del Río; María J Martínez-Iñigo; María J Martínez; Angel T Martínez
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

8.  Structural characterization of lignin during Pinus taeda wood treatment with Ceriporiopsis subvermispora.

Authors:  Anderson Guerra; Régis Mendonça; André Ferraz; Fachuang Lu; John Ralph
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

9.  Evidence That Ceriporiopsis subvermispora Degrades Nonphenolic Lignin Structures by a One-Electron-Oxidation Mechanism.

Authors:  E Srebotnik; K A Jensen; S Kawai; K E Hammel
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

10.  Improved manganese-oxidizing activity of DypB, a peroxidase from a lignolytic bacterium.

Authors:  Rahul Singh; Jason C Grigg; Wei Qin; John F Kadla; Michael E P Murphy; Lindsay D Eltis
Journal:  ACS Chem Biol       Date:  2013-01-18       Impact factor: 5.100

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