Literature DB >> 16532363

Cloning and characterization of a cold-active xylanase enzyme from an environmental DNA library.

Charles C Lee1, Rena E Kibblewhite-Accinelli, Kurt Wagschal, George H Robertson, Dominic W S Wong.   

Abstract

There is a great interest in xylanases due to the wide variety of industrial applications for these enzymes. We cloned a xylanase gene (xyn8) from an environmental genomic DNA library. The encoded enzyme was predicted to be 399 amino acids with a molecular weight of 45.9 kD. The enzyme was categorized as a glycosyl hydrolase family 8 member based on sequence analysis of the putative catalytic domain. The purified enzyme was thermolabile, had an activity temperature optimum of 20 degrees C on native xylan substrate, and retained significant activity at lower temperatures. At 4 degrees C, the apparent K (m) was 3.7 mg/ml, and the apparent k (cat) was 123/s.

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Year:  2006        PMID: 16532363     DOI: 10.1007/s00792-005-0499-3

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  25 in total

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2.  The structure of a cold-adapted family 8 xylanase at 1.3 A resolution. Structural adaptations to cold and investgation of the active site.

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Journal:  J Biol Chem       Date:  2002-12-09       Impact factor: 5.157

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4.  Updating the sequence-based classification of glycosyl hydrolases.

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Review 5.  Microbial xylanolytic enzyme system: properties and applications.

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6.  Atomic (0.94 A) resolution structure of an inverting glycosidase in complex with substrate.

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7.  Site-directed mutagenesis of the putative active site of endoglucanase K from Bacillus sp. KSM-330.

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8.  Isolation and characterization of a cold-active xylanase enzyme from Flavobacterium sp.

Authors:  Charles C Lee; Michael Smith; Rena E Kibblewhite-Accinelli; Tina G Williams; Kurt Wagschal; George H Robertson; Dominic W S Wong
Journal:  Curr Microbiol       Date:  2006-01-31       Impact factor: 2.188

9.  Unusual microbial xylanases from insect guts.

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Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

10.  A novel family 8 xylanase, functional and physicochemical characterization.

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Journal:  J Biol Chem       Date:  2002-06-27       Impact factor: 5.157

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  18 in total

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2.  Crystallization and preliminary X-ray analysis of a cold-active endo-β-1,4-D-xylanase from glycoside hydrolase family 8.

Authors:  Jan Schoepe; Annick Pollet; Priscilla Verjans; Jan A Delcour; Sergei V Strelkov; Christophe M Courtin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-24

Review 3.  Alkaliphilic bacteria: applications in industrial biotechnology.

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4.  Kinetic and thermodynamic characterization of a novel low-temperature-active xylanase from Arthrobacter sp. GN16 isolated from the feces of Grus nigricollis.

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Journal:  Bioengineered       Date:  2015-01-14       Impact factor: 3.269

5.  A New Group of Modular Xylanases in Glycoside Hydrolase Family 8 from Marine Bacteria.

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6.  Cloning, expression and characterization of a novel cold-active and halophilic xylanase from Zunongwangia profunda.

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Journal:  Extremophiles       Date:  2014-01-25       Impact factor: 2.395

7.  Characterization of a novel cold-active xylanase from Luteimonas species.

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8.  Fusion of the OsmC domain from esterase EstO confers thermolability to the cold-active xylanase Xyn8 from Pseudoalteromonas arctica.

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Journal:  Extremophiles       Date:  2011-02-18       Impact factor: 2.395

9.  Two new xylanases with different substrate specificities from the human gut bacterium Bacteroides intestinalis DSM 17393.

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Review 10.  Achievements and new knowledge unraveled by metagenomic approaches.

Authors:  Carola Simon; Rolf Daniel
Journal:  Appl Microbiol Biotechnol       Date:  2009-09-16       Impact factor: 4.813

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