Literature DB >> 16531460

Phosphoproteomics in Arabidopsis: moving from empirical to predictive science.

Scott C Peck1.   

Abstract

Although protein phosphorylation is integral to the regulation of protein function in diverse biological responses, relatively little is currently known about the rules that govern phosphorylation in plants. This review will discuss how the data acquired by evolving phosphoproteomic methods are beginning to fill the gaps in our knowledge. In addition, ways are suggested in which new quantitative methods in conjunction with extrapolating from genomic data may provide a strategy to predict components of signalling networks that may be co-ordinately regulated.

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Year:  2006        PMID: 16531460     DOI: 10.1093/jxb/erj126

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  10 in total

1.  Phosphoproteomic identification of targets of the Arabidopsis sucrose nonfermenting-like kinase SnRK2.8 reveals a connection to metabolic processes.

Authors:  Ryoung Shin; Sophie Alvarez; Adrien Y Burch; Joseph M Jez; Daniel P Schachtman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-02       Impact factor: 11.205

2.  Conservation of protein phosphorylation sites within gene families and across species.

Authors:  Frans Jm Maathuis
Journal:  Plant Signal Behav       Date:  2008-11

3.  The AGC kinase, PINOID, blocks interactive ABCB/PIN auxin transport.

Authors:  Bangjun Wang; Sina Henrichs; Markus Geisler
Journal:  Plant Signal Behav       Date:  2012-10-16

Review 4.  Systems biology approaches to abscisic acid signaling.

Authors:  Taishi Umezawa
Journal:  J Plant Res       Date:  2011-04-02       Impact factor: 2.629

5.  Phosphoproteomic Approaches to Evaluate ABA Signaling.

Authors:  Kota Yamashita; Taishi Umezawa
Journal:  Methods Mol Biol       Date:  2022

6.  Protein Preparation for Proteomic Analysis of the Unfolded Protein Response in Arabidopsis thaliana.

Authors:  Yunting Pu; Federica Brandizzi
Journal:  Methods Mol Biol       Date:  2022

7.  Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana.

Authors:  Diego Mauricio Riaño-Pachón; Sabrina Kleessen; Jost Neigenfind; Pawel Durek; Elke Weber; Wolfgang R Engelsberger; Dirk Walther; Joachim Selbig; Waltraud X Schulze; Birgit Kersten
Journal:  BMC Genomics       Date:  2010-07-01       Impact factor: 3.969

8.  Identification and analysis of phosphorylation status of proteins in dormant terminal buds of poplar.

Authors:  Chang-Cai Liu; Chang-Fu Liu; Hong-Xia Wang; Zhi-Ying Shen; Chuan-Ping Yang; Zhi-Gang Wei
Journal:  BMC Plant Biol       Date:  2011-11-11       Impact factor: 4.215

9.  Medicago PhosphoProtein Database: a repository for Medicago truncatula phosphoprotein data.

Authors:  Christopher M Rose; Muthusubramanian Venkateshwaran; Paul A Grimsrud; Michael S Westphall; Michael R Sussman; Joshua J Coon; Jean-Michel Ané
Journal:  Front Plant Sci       Date:  2012-06-11       Impact factor: 5.753

10.  Phosphoproteomic Analysis of Soybean Roots Under Salinity by Using the iTRAQ Labeling Approach.

Authors:  Yuchen Qian; Jia Xu; Erxu Pi
Journal:  Methods Mol Biol       Date:  2021
  10 in total

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