Literature DB >> 16529715

Multiplexing RT-PCR for the detection of multiple miRNA species in small samples.

Kaiqin Lao1, Nan Lan Xu, Vivian Yeung, Caifu Chen, Kenneth J Livak, Neil A Straus.   

Abstract

MicroRNAs are short (approximately 22 nucleotides), non-coding RNAs that play critical roles in gene regulation and may be used as rapid precise diagnostic indicators of early stages of cancer. The small size of these RNAs makes detection of multiple microRNA species in very small samples problematic. Here we investigate the parameters associated with multiplexing RT-PCR to obtain relative abundance profiles of multiple microRNAs in small sample sizes down to the amount of RNA found in a single cell.

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Year:  2006        PMID: 16529715     DOI: 10.1016/j.bbrc.2006.02.106

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  46 in total

1.  MicroRNA miR-137 regulates neuronal maturation by targeting ubiquitin ligase mind bomb-1.

Authors:  Richard D Smrt; Keith E Szulwach; Rebecca L Pfeiffer; Xuekun Li; Weixiang Guo; Manavendra Pathania; Zhao-Qian Teng; Yuping Luo; Junmin Peng; Angelique Bordey; Peng Jin; Xinyu Zhao
Journal:  Stem Cells       Date:  2010-06       Impact factor: 6.277

2.  miR-ID: a novel, circularization-based platform for detection of microRNAs.

Authors:  Pavan Kumar; Brian H Johnston; Sergei A Kazakov
Journal:  RNA       Date:  2010-12-17       Impact factor: 4.942

3.  Comprehensive selection of reference genes for quantitative gene expression analysis during seed development in Brassica napus.

Authors:  Ronei Dorneles Machado; Ana Paula Christoff; Guilherme Loss-Morais; Márcia Margis-Pinheiro; Rogério Margis; Ana Paula Körbes
Journal:  Plant Cell Rep       Date:  2015-02-27       Impact factor: 4.570

4.  Somatodendritic microRNAs identified by laser capture and multiplex RT-PCR.

Authors:  Min-Jeong Kye; Tsunglin Liu; Sasha F Levy; Nan Lan Xu; Benjamin B Groves; Richard Bonneau; Kaiqin Lao; Kenneth S Kosik
Journal:  RNA       Date:  2007-06-25       Impact factor: 4.942

Review 5.  Real-time PCR quantification of precursor and mature microRNA.

Authors:  Thomas D Schmittgen; Eun Joo Lee; Jinmai Jiang; Anasuya Sarkar; Liuqing Yang; Terry S Elton; Caifu Chen
Journal:  Methods       Date:  2008-01       Impact factor: 3.608

Review 6.  Unraveling the Role of MicroRNAs in Mycobacterium tuberculosis Infection and Disease: Advances and Pitfalls.

Authors:  Cinthya Ruiz-Tagle; Rodrigo Naves; María Elvira Balcells
Journal:  Infect Immun       Date:  2020-02-20       Impact factor: 3.441

7.  Heterogeneous dysregulation of microRNAs across the autism spectrum.

Authors:  Kawther Abu-Elneel; Tsunglin Liu; Francesca S Gazzaniga; Yuhei Nishimura; Dennis P Wall; Daniel H Geschwind; Kaiqin Lao; Kenneth S Kosik
Journal:  Neurogenetics       Date:  2008-06-19       Impact factor: 2.660

8.  Geographical mapping of a multifocal thyroid tumour using genetic alteration analysis & miRNA profiling.

Authors:  Sinéad T Aherne; Paul C Smyth; Richard J Flavin; Susan M Russell; Karen M Denning; Jing Huan Li; Simone M Guenther; John J O'Leary; Orla M Sheils
Journal:  Mol Cancer       Date:  2008-12-04       Impact factor: 27.401

9.  MicroRNAs as Novel Biomarkers for Breast Cancer.

Authors:  H M Heneghan; N Miller; A J Lowery; K J Sweeney; M J Kerin
Journal:  J Oncol       Date:  2009-07-20       Impact factor: 4.375

10.  Systematic validation of predicted microRNAs for cyclin D1.

Authors:  Qiong Jiang; Ming-Guang Feng; Yin-Yuan Mo
Journal:  BMC Cancer       Date:  2009-06-18       Impact factor: 4.430

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