Literature DB >> 16528767

Hydrogen-hydrogen bonding in planar biphenyl, predicted by atoms-in-molecules theory, does not exist.

Jordi Poater1, Miquel Solà, F Matthias Bickelhaupt.   

Abstract

Based on an Atoms-in-Molecules (AIM) analysis, Matta et al. recently claimed evidence for the existence of hydrogen-hydrogen bonding between ortho-hydrogen atoms, pointing towards each other from adjacent phenyl groups in planar biphenyl. This AIM result is opposed to the classical view that nonbonded steric repulsion between the ortho-hydrogen atoms is responsible for the higher energy of the planar as compared to the twisted geometry of biphenyl. In the present work, we address the question if hydrogen-hydrogen bonding in biphenyl exists, as suggested by AIM, or not. To this end, we have analyzed the potential energy surface for internal rotation of biphenyl in terms of two interacting phenyl radicals using density functional theory (DFT) at BP86/TZ2P. A detailed analysis of the bonding mechanism and a quantitative bond energy decomposition in the framework of Kohn-Sham DFT show that Pauli (or overlap) repulsion, mainly between C(ortho)--H(ortho) phenyl MOs, prevents biphenyl from being planar and forces it to adopt a twisted equilibrium geometry. Furthermore, a derivative of biphenyl in which all four ortho-hydrogen atoms have been removed does adopt a planar equilibrium geometry. Thus, our results confirm the classical view of steric repulsion between ortho-hydrogen atoms in biphenyl and they falsify the hypothesis of hydrogen-hydrogen bonding.

Entities:  

Year:  2006        PMID: 16528767     DOI: 10.1002/chem.200500850

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  20 in total

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6.  On the origin of internal rotation in ammonia borane.

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7.  The activation strain model and molecular orbital theory.

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Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2015-05-18

8.  Adaptive binding and selection of compressed 1,ω-diammonium-alkanes via molecular encapsulation in water.

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Journal:  Chem Sci       Date:  2015-01-12       Impact factor: 9.825

9.  Novel biphenyl ester derivatives as tyrosinase inhibitors: Synthesis, crystallographic, spectral analysis and molecular docking studies.

Authors:  Huey Chong Kwong; C S Chidan Kumar; Siau Hui Mah; Tze Shyang Chia; Ching Kheng Quah; Zi Han Loh; Siddegowda Chandraju; Gin Keat Lim
Journal:  PLoS One       Date:  2017-02-27       Impact factor: 3.240

10.  Crystal structure and Hirshfeld surface analysis of a pyridiniminium bromide salt: 1-[2-([1,1'-biphen-yl]-4-yl)-2-oxoeth-yl]-3-methyl-1,4-di-hydro-pyridin-4-iminium bromide.

Authors:  S N Sheshadri; Huey Chong Kwong; C S Chidan Kumar; Ching Kheng Quah; B P Siddaraju; M K Veeraiah; Muhammad Aiman Bin Abd Hamid; Ismail Warad
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-04-27
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