Literature DB >> 16527544

Scaling down: a PCR-based method to efficiently screen for desired knockouts in a high density Mycobacterium tuberculosis picked mutant library.

James M Lane1, Eric J Rubin.   

Abstract

Transposon mutagenesis produces random mycobacterial mutants at high frequency. Because they are random, however, it is difficult to isolate mutations in particular target genes. Here we describe the use of an arrayed library of Mycobacterium tuberculosis together with a PCR screening strategy to rapidly identify strains with defined insertion mutations. This method is useful for many genetic applications.

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Year:  2006        PMID: 16527544     DOI: 10.1016/j.tube.2006.01.015

Source DB:  PubMed          Journal:  Tuberculosis (Edinb)        ISSN: 1472-9792            Impact factor:   3.131


  5 in total

1.  Characterization of the proteasome accessory factor (paf) operon in Mycobacterium tuberculosis.

Authors:  Richard A Festa; Michael J Pearce; K Heran Darwin
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

2.  Rapid curation of gene disruption collections using Knockout Sudoku.

Authors:  Isao A Anzai; Lev Shaket; Oluwakemi Adesina; Michael Baym; Buz Barstow
Journal:  Nat Protoc       Date:  2017-09-14       Impact factor: 13.491

3.  Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing.

Authors:  Kristof Vandewalle; Nele Festjens; Evelyn Plets; Marnik Vuylsteke; Yvan Saeys; Nico Callewaert
Journal:  Nat Commun       Date:  2015-05-11       Impact factor: 14.919

4.  LI-Detector: a Method for Curating Ordered Gene-Replacement Libraries.

Authors:  Emily C A Goodall; Faye C Morris; Samantha A McKeand; Rudi Sullivan; Isabel A Warner; Emma Sheehan; Gabriela Boelter; Christopher Icke; Adam F Cunningham; Jeffrey A Cole; Manuel Banzhaf; Jack A Bryant; Ian R Henderson
Journal:  Microbiol Spectr       Date:  2022-07-20

5.  Comprehensive Functional Analysis of the Enterococcus faecalis Core Genome Using an Ordered, Sequence-Defined Collection of Insertional Mutations in Strain OG1RF.

Authors:  Jennifer L Dale; Kenneth B Beckman; Julia L E Willett; Jennifer L Nilson; Nagendra P Palani; Joshua A Baller; Adam Hauge; Daryl M Gohl; Raymond Erickson; Dawn A Manias; Michael J Sadowsky; Gary M Dunny
Journal:  mSystems       Date:  2018-09-11       Impact factor: 7.324

  5 in total

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