Literature DB >> 16517651

Macroscopic streamer growths in acidic, metal-rich mine waters in north wales consist of novel and remarkably simple bacterial communities.

Kevin B Hallberg1, Kris Coupland, Sakurako Kimura, D Barrie Johnson.   

Abstract

The microbial composition of acid streamers (macroscopic biofilms) in acidic, metal-rich waters in two locations (an abandoned copper mine and a chalybeate spa) in north Wales was studied using cultivation-based and biomolecular techniques. Known chemolithotrophic and heterotrophic acidophiles were readily isolated from disrupted streamers, but they accounted for only <1 to 7% of the total microorganisms present. Fluorescent in situ hybridization (FISH) revealed that 80 to 90% of the microbes in both types of streamers were beta-Proteobacteria. Terminal restriction fragment length polymorphism analysis of the streamers suggested that a single bacterial species was dominant in the copper mine streamers, while two distinct bacteria (one of which was identical to the bacterium found in the copper mine streamers) accounted for about 90% of the streamers in the spa water. 16S rRNA gene clone libraries showed that the beta-proteobacterium found in both locations was closely related to a clone detected previously in acid mine drainage in California and that its closest characterized relatives were neutrophilic ammonium oxidizers. Using a modified isolation technique, this bacterium was isolated from the copper mine streamers and shown to be a novel acidophilic autotrophic iron oxidizer. The beta-proteobacterium found only in the spa streamers was closely related to the neutrophilic iron oxidizer Gallionella ferruginea. FISH analysis using oligonucleotide probes that targeted the two beta-proteobacteria confirmed that the biodiversity of the streamers in both locations was very limited. The microbial compositions of the acid streamers found at the two north Wales sites are very different from the microbial compositions of the previously described acid streamers found at Iron Mountain, California, and the Rio Tinto, Spain.

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Year:  2006        PMID: 16517651      PMCID: PMC1393227          DOI: 10.1128/AEM.72.3.2022-2030.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  24 in total

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Authors:  K B Hallberg; D B Johnson
Journal:  Adv Appl Microbiol       Date:  2001       Impact factor: 5.086

Review 2.  Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

Authors:  P Hugenholtz; B M Goebel; N R Pace
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

3.  Distribution of thiobacillus ferrooxidans and leptospirillum ferrooxidans: implications for generation of acid mine drainage

Authors: 
Journal:  Science       Date:  1998-03-06       Impact factor: 47.728

4.  Aerobic heterotrophic bacteria indigenous to pH 2.8 acid mine water: predominant slime-producing bacteria in acid streamers.

Authors:  P R Dugan; C B MacMillan; R M Pfister
Journal:  J Bacteriol       Date:  1970-03       Impact factor: 3.490

5.  Design and Performance of rRNA Targeted Oligonucleotide Probes for in Situ Detection and Phylogenetic Identification of Microorganisms Inhabiting Acid Mine Drainage Environments.

Authors:  P.L. Bond; J.F. Banfield
Journal:  Microb Ecol       Date:  2001-02       Impact factor: 4.552

6.  Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems.

Authors:  P L Bond; G K Druschel; J F Banfield
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

7.  An archaeal iron-oxidizing extreme acidophile important in acid mine drainage.

Authors:  K J Edwards; P L Bond; T M Gihring; J F Banfield
Journal:  Science       Date:  2000-03-10       Impact factor: 47.728

8.  Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis.

Authors:  D Barrie Johnson; Naoko Okibe; Kevin B Hallberg
Journal:  J Microbiol Methods       Date:  2005-03       Impact factor: 2.363

9.  Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysis.

Authors:  Albin Alfreider; Carsten Vogt; Wolfgang Babel
Journal:  Syst Appl Microbiol       Date:  2002-08       Impact factor: 4.022

10.  Microbial ecology of an extreme acidic environment, the Tinto River.

Authors:  E González-Toril; E Llobet-Brossa; E O Casamayor; R Amann; R Amils
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

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  66 in total

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Authors:  Radha Prasanna; Sachitra Kumar Ratha; Claudia Rojas; Mary Ann Bruns
Journal:  Folia Microbiol (Praha)       Date:  2011-10-27       Impact factor: 2.099

2.  Characterization of bacterial community structure in a drinking water distribution system during an occurrence of red water.

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Journal:  Appl Environ Microbiol       Date:  2010-09-17       Impact factor: 4.792

3.  Visualizing acidophilic microorganisms in biofilm communities using acid stable fluorescence dyes.

Authors:  Sina Brockmann; Thuro Arnold; Bernd Schweder; Gert Bernhard
Journal:  J Fluoresc       Date:  2010-04-13       Impact factor: 2.217

4.  Laminar flow around corners triggers the formation of biofilm streamers.

Authors:  Roberto Rusconi; Sigolene Lecuyer; Laura Guglielmini; Howard A Stone
Journal:  J R Soc Interface       Date:  2010-03-31       Impact factor: 4.118

5.  Similar bacterial community composition in acidic mining lakes with different pH and lake chemistry.

Authors:  Heike Kampe; Claudia Dziallas; Hans-Peter Grossart; Norbert Kamjunke
Journal:  Microb Ecol       Date:  2010-05-22       Impact factor: 4.552

6.  Efficient Low-pH Iron Removal by a Microbial Iron Oxide Mound Ecosystem at Scalp Level Run.

Authors:  Christen L Grettenberger; Alexandra R Pearce; Kyle J Bibby; Daniel S Jones; William D Burgos; Jennifer L Macalady
Journal:  Appl Environ Microbiol       Date:  2017-03-17       Impact factor: 4.792

7.  Ecophysiology of Fe-cycling bacteria in acidic sediments.

Authors:  Shipeng Lu; Stefan Gischkat; Marco Reiche; Denise M Akob; Kevin B Hallberg; Kirsten Küsel
Journal:  Appl Environ Microbiol       Date:  2010-10-22       Impact factor: 4.792

8.  Application of recognition of individual genes-fluorescence in situ hybridization (RING-FISH) to detect nitrite reductase genes (nirK) of denitrifiers in pure cultures and environmental samples.

Authors:  Jennifer Pratscher; Catrin Stichternoth; Katrin Fichtl; Karl-Heinz Schleifer; Gesche Braker
Journal:  Appl Environ Microbiol       Date:  2008-12-12       Impact factor: 4.792

9.  Archaeal and bacterial communities of heavy metal contaminated acidic waters from zinc mine residues in Sepetiba Bay.

Authors:  Welington I Almeida; Ricardo P Vieira; Alexander Machado Cardoso; Cynthia B Silveira; Rebeca G Costa; Alessandra M Gonzalez; Rodolfo Paranhos; João A Medeiros; Flávia A Freitas; Rodolpho M Albano; Orlando B Martins
Journal:  Extremophiles       Date:  2008-12-17       Impact factor: 2.395

10.  Bacterial diversity in a mine water treatment plant.

Authors:  Elke Heinzel; Sabrina Hedrich; Eberhard Janneck; Franz Glombitza; Jana Seifert; Michael Schlömann
Journal:  Appl Environ Microbiol       Date:  2008-12-01       Impact factor: 4.792

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