Literature DB >> 16517099

Identification and characterization of the human retinoid X receptor alpha gene promoter.

Guojun Li1, Weihong Yin, Robert Chamberlain, David Hewett-Emmett, Jennifer N Roberts, Xiulan Yang, Scott M Lippman, John L Clifford.   

Abstract

Retinoid X receptors (RXRs) comprise a family of nuclear retinoid activated transcription factors that are members of the steroid hormone receptor superfamily. RXRs are obligate heterodimerization partners with several other hormone receptor family members, making them critical mediators of a wide range of signaling pathways. Retinoids have been used successfully for the prevention of a number of epithelial cancers, including skin squamous cell carcinoma (SCC). The reduced expression levels of retinoid receptors including RXRalpha, the predominant RXR expressed in skin, is associated with malignancy in skin SCC. In order to study the regulation of RXRalpha in skin SCC carcinogenesis we have previously mapped the majority of the human RXRalpha gene. In the present study we have identified its first exon and promoter region. Exon 1, which contains the translation start site, is located in a highly G+C rich region of the genome at least 58 kb centromeric from exon 2. The promoter region itself is unusually G+C rich (75% G+C in 1200 bp of upstream sequence), has 17 putative SP1 transcription factor binding sites and no TATA or CAAT boxes. Transient transfection experiments with RXRalpha promoter-luciferase reporter constructs in SRB12-p9 skin SCC cells, as well as with PC3 prostate carcinoma cells, revealed that RXRalpha transcription is relatively weak compared to the positive control thymidine kinase (TK) promoter and is stimulated by treatment with all-trans retinoic acid (ATRA), the biologically active form of vitamin A. These results indicate that the RXRalpha gene is transcribed at stable levels, similar to most housekeeping genes, and its transcription is regulated by ATRA. In addition, the 5' untranslated region of RXRalpha is highly G+C rich, resulting in a potentially stable folding pattern, that would place RXRalpha amongst a group of genes that are subject to regulation at the translational level.

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Year:  2006        PMID: 16517099     DOI: 10.1016/j.gene.2005.12.027

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  6 in total

1.  Childhood bone mineral content is associated with methylation status of the RXRA promoter at birth.

Authors:  Nicholas C Harvey; Allan Sheppard; Keith M Godfrey; Cameron McLean; Emma Garratt; Georgia Ntani; Lucy Davies; Robert Murray; Hazel M Inskip; Peter D Gluckman; Mark A Hanson; Karen A Lillycrop; Cyrus Cooper
Journal:  J Bone Miner Res       Date:  2014-03       Impact factor: 6.741

2.  Plasticizers used in food-contact materials affect adipogenesis in 3T3-L1 cells.

Authors:  Valentina Pomatto; Erika Cottone; Paolo Cocci; Matteo Mozzicafreddo; Gilberto Mosconi; Erik Russel Nelson; Francesco Alessandro Palermo; Patrizia Bovolin
Journal:  J Steroid Biochem Mol Biol       Date:  2018-02-02       Impact factor: 4.292

3.  Epigenetic gene promoter methylation at birth is associated with child's later adiposity.

Authors:  Keith M Godfrey; Allan Sheppard; Peter D Gluckman; Karen A Lillycrop; Graham C Burdge; Cameron McLean; Joanne Rodford; Joanne L Slater-Jefferies; Emma Garratt; Sarah R Crozier; B Starling Emerald; Catharine R Gale; Hazel M Inskip; Cyrus Cooper; Mark A Hanson
Journal:  Diabetes       Date:  2011-04-06       Impact factor: 9.461

4.  RXRA gene variations influence Alzheimer's disease risk and cholesterol metabolism.

Authors:  Heike Kölsch; Dieter Lütjohann; Frank Jessen; Julius Popp; Frank Hentschel; Peter Kelemen; Silvia Friedrichs; T A Wolfgang Maier; Reinhard Heun
Journal:  J Cell Mol Med       Date:  2009-03       Impact factor: 5.310

5.  Reduction in promotor methylation utilizing EGCG (epigallocatechin-3-gallate) restores RXRα expression in human colon cancer cells.

Authors:  Jay Morris; Vondina R Moseley; April B Cabang; Katie Coleman; Wei Wei; Elizabeth Garrett-Mayer; Michael J Wargovich
Journal:  Oncotarget       Date:  2016-06-07

6.  SNP rs11185644 of RXRA gene is identified for dose-response variability to vitamin D3 supplementation: a randomized clinical trial.

Authors:  Mingzhi Zhang; Lan-Juan Zhao; Yu Zhou; Rhamee Badr; Patrice Watson; An Ye; Boting Zhou; Jigang Zhang; Hong-Wen Deng; Robert R Recker; Joan M Lappe
Journal:  Sci Rep       Date:  2017-01-12       Impact factor: 4.379

  6 in total

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