Literature DB >> 16515787

Entamoeba histolytica: computational identification of putative microRNA candidates.

Subhajyoti De1, Dibyarupa Pal, Sudip K Ghosh.   

Abstract

MicroRNAs are an abundant class of approximately 20-24-nucleotide noncoding RNAs that control the expression of several genes at the post-transcriptional level, regulating several important biochemical pathways. MicroRNAs have been identified in many vertebrates including humans, and also in flies, nematodes, plants, and viruses. In the present work we have identified seventeen putative candidate microRNAs in the pathogenic parasite Entamoeba histolytica using a bioinformatic approach. Putative microRNA identification in E. histolytica may act as a starting reference for cloning and characterization of miRNAs in Entamoeba genome.

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Year:  2006        PMID: 16515787     DOI: 10.1016/j.exppara.2006.01.009

Source DB:  PubMed          Journal:  Exp Parasitol        ISSN: 0014-4894            Impact factor:   2.011


  16 in total

Review 1.  MicroRNAs of parasites: current status and future perspectives.

Authors:  Quan Liu; Wenbin Tuo; Hongwei Gao; Xing-Quan Zhu
Journal:  Parasitol Res       Date:  2010-06-08       Impact factor: 2.289

2.  Silencing the cleavage factor CFIm25 as a new strategy to control Entamoeba histolytica parasite.

Authors:  Juan David Ospina-Villa; Nancy Guillén; Cesar Lopez-Camarillo; Jacqueline Soto-Sanchez; Esther Ramirez-Moreno; Raul Garcia-Vazquez; Carlos A Castañon-Sanchez; Abigail Betanzos; Laurence A Marchat
Journal:  J Microbiol       Date:  2017-09-28       Impact factor: 3.422

Review 3.  Untranslated regions of mRNA and their role in regulation of gene expression in protozoan parasites.

Authors:  Shilpa J Rao; Sangeeta Chatterjee; Jayantapal K Pal
Journal:  J Biosci       Date:  2017-03       Impact factor: 1.826

Review 4.  Trans-kingdom small RNA transfer during host-pathogen interactions: The case of P. falciparum and erythrocytes.

Authors:  Katelyn A Walzer; Jen-Tsan Chi
Journal:  RNA Biol       Date:  2017-02-17       Impact factor: 4.652

Review 5.  RNA interference in Entamoeba histolytica: implications for parasite biology and gene silencing.

Authors:  Hanbang Zhang; Justine M Pompey; Upinder Singh
Journal:  Future Microbiol       Date:  2011-01       Impact factor: 3.165

6.  MicroRNA profiling of Neospora caninum tachyzoites (NC-1) using a high-throughput approach.

Authors:  Gang Liu; Lijun Jia; Qingyan Shao; Huijun Lu; Jixue Zhao; Jigang Yin
Journal:  Parasitol Res       Date:  2021-04-24       Impact factor: 2.289

Review 7.  microRNAs in parasites and parasite infection.

Authors:  Yadong Zheng; Xuepeng Cai; Janette E Bradley
Journal:  RNA Biol       Date:  2013-02-07       Impact factor: 4.652

8.  Short hairpin RNA-mediated knockdown of protein expression in Entamoeba histolytica.

Authors:  Alicia S Linford; Heriberto Moreno; Katelyn R Good; Hanbang Zhang; Upinder Singh; William A Petri
Journal:  BMC Microbiol       Date:  2009-02-17       Impact factor: 3.605

9.  Use of bacterially expressed dsRNA to downregulate Entamoeba histolytica gene expression.

Authors:  Carlos F Solis; Julien Santi-Rocca; Doranda Perdomo; Christian Weber; Nancy Guillén
Journal:  PLoS One       Date:  2009-12-23       Impact factor: 3.240

10.  Identification and characterization of microRNAs from Entamoeba histolytica HM1-IMSS.

Authors:  Fermín Mar-Aguilar; Victor Trevino; Jannet E Salinas-Hernández; Marcela M Taméz-Guerrero; María P Barrón-González; Eufemia Morales-Rubio; Jaime Treviño-Neávez; Jorge A Verduzco-Martínez; Mario R Morales-Vallarta; Diana Reséndez-Pérez
Journal:  PLoS One       Date:  2013-07-12       Impact factor: 3.240

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