Literature DB >> 16513552

QSAR approach for mixture toxicity prediction using independent latent descriptors and fuzzy membership functions.

M Mwense1, X Z Wang, F V Buontempo, N Horan, A Young, D Osborn.   

Abstract

The principle of using a singe model to predict the toxicity of mixtures of chemicals based on the characterisation of the degrees of similarity and dissimilarity of the constituent chemicals using descriptors has been demonstrated in a previous work. The current study introduces a feature extraction technique, independent component analysis, to the method to remove the correlations and dependencies between descriptors and reduce the dimension prior to similarity and dissimilarity calculations. In addition, a goal attainment multi-objective optimisation technique is used for the determination of the fuzzy membership function parameters. For three mixtures, which include a new mixture and two previously studied mixtures that all inhibit reproduction (via different mechanisms of action) in green freshwater algae scenedesmus vacuolatus, the approach showed better or equivalent prediction performance than either concentration addition or independent action models. Unlike QSARs for pure compounds that require large collections of data, the new approach for mixtures only requires one mixture at a particular composition to determine the necessary fuzzy membership function parameter values. These values can then be used to predict the toxicity of the mixture at any other compositions. This could potentially lead to a reduction in the frequency of bioassay tests. Use of the fuzzy membership functions and parameter values obtained for one mixture when used to predict the toxicity of a completely different mixture is also tested and it is found that the approach also gives prediction results with good accuracy.

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Year:  2006        PMID: 16513552     DOI: 10.1080/10659360600562202

Source DB:  PubMed          Journal:  SAR QSAR Environ Res        ISSN: 1026-776X            Impact factor:   3.000


  4 in total

1.  Analogue-based approaches in anti-cancer compound modelling: the relevance of QSAR models.

Authors:  Mohammed Hussaini Bohari; Hemant Kumar Srivastava; Garikapati Narahari Sastry
Journal:  Org Med Chem Lett       Date:  2011-07-18

2.  Pesticides, cosmetics, drugs: identical and opposite influences of various molecular features as measures of endpoints similarity and dissimilarity.

Authors:  Andrey A Toropov; Alla P Toropova; Marco Marzo; Edoardo Carnesecchi; Gianluca Selvestrel; Emilio Benfenati
Journal:  Mol Divers       Date:  2020-04-23       Impact factor: 2.943

3.  Linear regression model for predicting interactive mixture toxicity of pesticide and ionic liquid.

Authors:  Li-Tang Qin; Jie Wu; Ling-Yun Mo; Hong-Hu Zeng; Yan-Peng Liang
Journal:  Environ Sci Pollut Res Int       Date:  2015-05-02       Impact factor: 4.223

4.  Acute toxicity of binary mixtures: alternative methods, QSAR and mechanisms.

Authors:  Miloň Tichý; Iveta Hanzlíková; Marián Rucki; Adéla Pokorná; Rút Uzlová; Jana Tumová
Journal:  Interdiscip Toxicol       Date:  2008-06
  4 in total

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