Literature DB >> 16511658

On the application of "equation-free modelling" to neural systems.

Carlo R Laing1.   

Abstract

"Equation-free modelling" is a recently-developed technique for bridging the gap between detailed, microscopic descriptions of systems and macroscopic descriptions of their collective behaviour. It uses short, repeated bursts of simulation of the microscopic dynamics to analyse the effective macroscopic equations, even though such equations are not directly available for evaluation. This paper demonstrates these techniques on a variety of networks of model neurons, and discusses the advantages and limitations of such an approach. New results include an understanding of the effects of including gap junctions in a model capable of sustaining spatially localised "bumps" of activity, and an investigation of a network of coupled bursting neurons.

Mesh:

Year:  2006        PMID: 16511658     DOI: 10.1007/s10827-006-3843-z

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  14 in total

1.  Fast global oscillations in networks of integrate-and-fire neurons with low firing rates.

Authors:  N Brunel; V Hakim
Journal:  Neural Comput       Date:  1999-10-01       Impact factor: 2.026

2.  Dynamics of spiking neurons with electrical coupling.

Authors:  C C Chow; N Kopell
Journal:  Neural Comput       Date:  2000-07       Impact factor: 2.026

3.  Turning on and off with excitation: the role of spike-timing asynchrony and synchrony in sustained neural activity.

Authors:  B S Gutkin; C R Laing; C L Colby; C C Chow; G B Ermentrout
Journal:  J Comput Neurosci       Date:  2001 Sep-Oct       Impact factor: 1.621

4.  Stationary bumps in networks of spiking neurons.

Authors:  C R Laing; C C Chow
Journal:  Neural Comput       Date:  2001-07       Impact factor: 2.026

5.  Rate models for conductance-based cortical neuronal networks.

Authors:  Oren Shriki; David Hansel; Haim Sompolinsky
Journal:  Neural Comput       Date:  2003-08       Impact factor: 2.026

6.  Dynamics of deterministic and stochastic paired excitatory-inhibitory delayed feedback.

Authors:  Carlo R Laing; André Longtin
Journal:  Neural Comput       Date:  2003-12       Impact factor: 2.026

7.  Inhibitory feedback required for network oscillatory responses to communication but not prey stimuli.

Authors:  Brent Doiron; Maurice J Chacron; Leonard Maler; André Longtin; Joseph Bastian
Journal:  Nature       Date:  2003-01-30       Impact factor: 49.962

8.  A quantitative description of short-term plasticity at excitatory synapses in layer 2/3 of rat primary visual cortex.

Authors:  J A Varela; K Sen; J Gibson; J Fost; L F Abbott; S B Nelson
Journal:  J Neurosci       Date:  1997-10-15       Impact factor: 6.167

9.  Chemical and electrical synapses perform complementary roles in the synchronization of interneuronal networks.

Authors:  Nancy Kopell; Bard Ermentrout
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-15       Impact factor: 11.205

10.  Neural architecture of the electrosensory lateral line lobe: adaptations for coincidence detection, a sensory searchlight and frequency-dependent adaptive filtering

Authors: 
Journal:  J Exp Biol       Date:  1999-05       Impact factor: 3.312

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  4 in total

Review 1.  Simulation of networks of spiking neurons: a review of tools and strategies.

Authors:  Romain Brette; Michelle Rudolph; Ted Carnevale; Michael Hines; David Beeman; James M Bower; Markus Diesmann; Abigail Morrison; Philip H Goodman; Frederick C Harris; Milind Zirpe; Thomas Natschläger; Dejan Pecevski; Bard Ermentrout; Mikael Djurfeldt; Anders Lansner; Olivier Rochel; Thierry Vieville; Eilif Muller; Andrew P Davison; Sami El Boustani; Alain Destexhe
Journal:  J Comput Neurosci       Date:  2007-07-12       Impact factor: 1.621

2.  Macroscopic coherent structures in a stochastic neural network: from interface dynamics to coarse-grained bifurcation analysis.

Authors:  Daniele Avitable; Kyle C A Wedgwood
Journal:  J Math Biol       Date:  2017-02-01       Impact factor: 2.259

3.  Reduced models for binocular rivalry.

Authors:  Carlo R Laing; Thomas Frewen; Ioannis G Kevrekidis
Journal:  J Comput Neurosci       Date:  2010-02-25       Impact factor: 1.621

Review 4.  Numerical Bifurcation Theory for High-Dimensional Neural Models.

Authors:  Carlo R Laing
Journal:  J Math Neurosci       Date:  2014-07-25       Impact factor: 1.300

  4 in total

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