Literature DB >> 16511317

Purification, crystallization and preliminary characterization of a putative LmbE-like deacetylase from Bacillus cereus.

Vasiliki E Fadouloglou1, Dina Kotsifaki, Anastasia D Gazi, Georgios Fellas, Chrysi Meramveliotaki, Alexandra Deli, Emmanuel Psylinakis, Vassilis Bouriotis, Michael Kokkinidis.   

Abstract

The Bacillus cereus BC1534 protein, a putative deacetylase from the LmbE family, has been purified to homogeneity and crystallized using the hanging-drop vapour-diffusion method. Crystals of the 26 kDa protein grown from MPD and acetate buffer belong to space group R32, with unit-cell parameters a = b = 76.7, c = 410.5 A (in the hexagonal setting). A complete native data set was collected to a resolution of 2.5 A from a single cryoprotected crystal using synchrotron radiation. As BC1534 shows significant sequence homology with an LmbE-like protein of known structure from Thermus thermophilus, molecular replacement will be used for crystal structure determination.

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Year:  2006        PMID: 16511317      PMCID: PMC2197166          DOI: 10.1107/S1744309106004660

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  10 in total

1.  N-Acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase (MshB) is a key enzyme in mycothiol biosynthesis.

Authors:  G L Newton; Y Av-Gay; R C Fahey
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

2.  Characterization of an exo-beta-D-glucosaminidase involved in a novel chitinolytic pathway from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takeshi Tanaka; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

3.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

Review 4.  The molecular replacement method.

Authors:  M G Rossmann
Journal:  Acta Crystallogr A       Date:  1990-02-01       Impact factor: 2.290

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Authors:  Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian T Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan A Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle Gwinn; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa M Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

7.  Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.

Authors:  Natalia Ivanova; Alexei Sorokin; Iain Anderson; Nathalie Galleron; Benjamin Candelon; Vinayak Kapatral; Anamitra Bhattacharyya; Gary Reznik; Natalia Mikhailova; Alla Lapidus; Lien Chu; Michael Mazur; Eugene Goltsman; Niels Larsen; Mark D'Souza; Theresa Walunas; Yuri Grechkin; Gordon Pusch; Robert Haselkorn; Michael Fonstein; S Dusko Ehrlich; Ross Overbeek; Nikos Kyrpides
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

8.  Concerted action of diacetylchitobiose deacetylase and exo-beta-D-glucosaminidase in a novel chitinolytic pathway in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takeshi Tanaka; Toshiaki Fukui; Shinsuke Fujiwara; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Biol Chem       Date:  2004-05-10       Impact factor: 5.157

9.  Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8.

Authors:  Noriko Handa; Takaho Terada; Yuki Kamewari; Hiroaki Hamana; Jeremy R H Tame; Sam-Yong Park; Kengo Kinoshita; Motonori Ota; Haruki Nakamura; Seiki Kuramitsu; Mikako Shirouzu; Shigeyuki Yokoyama
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

10.  The crystal structure of 1-D-myo-inosityl 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase (MshB) from Mycobacterium tuberculosis reveals a zinc hydrolase with a lactate dehydrogenase fold.

Authors:  Jason T Maynes; Craig Garen; Maia M Cherney; Gerald Newton; Dorit Arad; Yossef Av-Gay; Robert C Fahey; Michael N G James
Journal:  J Biol Chem       Date:  2003-09-04       Impact factor: 5.157

  10 in total

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