Literature DB >> 16511290

Purification and crystallization of dengue and West Nile virus NS2B-NS3 complexes.

Allan D'Arcy1, Maxime Chaillet, Nikolaus Schiering, Frederic Villard, Siew Pheng Lim, Peggy Lefeuvre, Paul Erbel.   

Abstract

Both dengue and West Nile virus infections are an increasing risk to humans, not only in tropical and subtropical areas, but also in North America and parts of Europe. These viral infections are generally transmitted by mosquitoes, but may also be tick-borne. Infection usually results in mild flu-like symptoms, but can also cause encephalitis and fatalities. Approximately 2799 severe West Nile virus cases were reported this year in the United States, resulting in 102 fatalities. With this alarming increase in the number of West Nile virus infections in western countries and the fact that dengue virus already affects millions of people per year in tropical and subtropical climates, there is a real need for effective medicines. A possible therapeutic target to combat these viruses is the protease, which is essential for virus replication. In order to provide structural information to help to guide a lead identification and optimization program, crystallizations of the NS2B-NS3 protease complexes from both dengue and West Nile viruses have been initiated. Crystals that diffract to high resolution, suitable for three-dimensional structure determinations, have been obtained.

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Year:  2006        PMID: 16511290      PMCID: PMC2150946          DOI: 10.1107/S1744309106001199

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  6 in total

1.  Dengue virus NS3 serine protease. Crystal structure and insights into interaction of the active site with substrates by molecular modeling and structural analysis of mutational effects.

Authors:  H M Murthy; S Clum; R Padmanabhan
Journal:  J Biol Chem       Date:  1999-02-26       Impact factor: 5.157

Review 2.  Inhibition of protein crystallization by evolutionary negative design.

Authors:  Jonathan P K Doye; Ard A Louis; Michele Vendruscolo
Journal:  Phys Biol       Date:  2004-06       Impact factor: 2.583

3.  Dengue/dengue hemorrhagic fever: the emergence of a global health problem.

Authors:  D J Gubler; G G Clark
Journal:  Emerg Infect Dis       Date:  1995 Apr-Jun       Impact factor: 6.883

4.  Use of dynamic light scattering to assess crystallizability of macromolecules and macromolecular assemblies.

Authors:  A R Ferré-D'Amaré; S K Burley
Journal:  Structure       Date:  1994-05-15       Impact factor: 5.006

5.  Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase.

Authors:  Sergey A Shiryaev; Boris I Ratnikov; Alexei V Chekanov; Sergey Sikora; Dmitri V Rozanov; Adam Godzik; Jun Wang; Jeffrey W Smith; Ziwei Huang; Iris Lindberg; Melanie A Samuel; Michael S Diamond; Alex Y Strongin
Journal:  Biochem J       Date:  2006-01-15       Impact factor: 3.857

6.  Extent and nature of contacts between protein molecules in crystal lattices and between subunits of protein oligomers.

Authors:  S Dasgupta; G H Iyer; S H Bryant; C E Lawrence; J A Bell
Journal:  Proteins       Date:  1997-08
  6 in total
  8 in total

1.  Mutagenesis of D80-82 and G83 residues in West Nile Virus NS2B: effects on NS2B-NS3 activity and viral replication.

Authors:  Fan Jia; Jingjing Fan; Bo Zhang; Zhiming Yuan
Journal:  Virol Sin       Date:  2013-01-16       Impact factor: 4.327

2.  Novel dengue virus NS2B/NS3 protease inhibitors.

Authors:  Hongmei Wu; Stefanie Bock; Mariya Snitko; Thilo Berger; Thomas Weidner; Steven Holloway; Manuel Kanitz; Wibke E Diederich; Holger Steuber; Christof Walter; Daniela Hofmann; Benedikt Weißbrich; Ralf Spannaus; Eliana G Acosta; Ralf Bartenschlager; Bernd Engels; Tanja Schirmeister; Jochen Bodem
Journal:  Antimicrob Agents Chemother       Date:  2014-12-08       Impact factor: 5.191

3.  Substrate inhibition kinetic model for West Nile virus NS2B-NS3 protease.

Authors:  Suzanne M Tomlinson; Stanley J Watowich
Journal:  Biochemistry       Date:  2008-10-15       Impact factor: 3.162

4.  Inter-organelle interactions between the ER and mitotic spindle facilitates Zika protease cleavage of human Kinesin-5 and results in mitotic defects.

Authors:  Liqiong Liu; Micquel Downs; Jesse Guidry; Edward J Wojcik
Journal:  iScience       Date:  2021-03-31

5.  Effects of NS2B-NS3 protease and furin inhibition on West Nile and Dengue virus replication.

Authors:  Jenny Kouretova; M Zouhir Hammamy; Anton Epp; Kornelia Hardes; Stephanie Kallis; Linlin Zhang; Rolf Hilgenfeld; Ralf Bartenschlager; Torsten Steinmetzer
Journal:  J Enzyme Inhib Med Chem       Date:  2017-12       Impact factor: 5.051

6.  Roles of ESCRT Proteins ALIX and CHMP4A and Their Interplay with Interferon-Stimulated Gene 15 during Tick-Borne Flavivirus Infection.

Authors:  Pham-Tue-Hung Tran; Abhilash I Chiramel; Magnus Johansson; Wessam Melik
Journal:  J Virol       Date:  2021-12-01       Impact factor: 5.103

7.  Dynamic Interactions of Post Cleaved NS2B Cofactor and NS3 Protease Identified by Integrative Structural Approaches.

Authors:  Jun-Ping Quek; Zheng Ser; Bing Liang Alvin Chew; Xin Li; Lili Wang; Radoslaw M Sobota; Dahai Luo; Wint Wint Phoo
Journal:  Viruses       Date:  2022-06-30       Impact factor: 5.818

Review 8.  The role of viral persistence in flavivirus biology.

Authors:  Luwanika Mlera; Wessam Melik; Marshall E Bloom
Journal:  Pathog Dis       Date:  2014-05-12       Impact factor: 3.166

  8 in total

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