Literature DB >> 16511214

Overexpression, purification, crystallization and preliminary X-ray diffraction analysis of the C-terminal domain of Ss-LrpB, a transcription regulator from Sulfolobus solfataricus.

Eveline Peeters1, Bach Thi Mai Hoa, Ingrid Zegers, Daniel Charlier, Dominique Maes.   

Abstract

Ss-LrpB from Sulfolobus solfataricus P2 belongs to the bacterial/archaeal superfamily of Lrp-like (leucine-responsive regulatory protein-like) transcription regulators. The N-terminal DNA-binding domain contains a HTH motif and the C-terminal domain contains an alphabeta-sandwich (betaalphabetabetaalphabeta fold). The C-terminal domain was overexpressed in Escherichia coli, purified and crystallized using the hanging-drop vapour-diffusion method. The crystals belong to space group P2(1)2(1)2, with unit-cell parameters a = 59.35, b = 74.86, c = 38.08 A and a data set was collected to 2.0 A resolution. Structure determination using a selenomethionine derivative is under way.

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Year:  2005        PMID: 16511214      PMCID: PMC1978139          DOI: 10.1107/S1744309105032148

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  19 in total

1.  Enhanced genome annotation using structural profiles in the program 3D-PSSM.

Authors:  L A Kelley; R M MacCallum; M J Sternberg
Journal:  J Mol Biol       Date:  2000-06-02       Impact factor: 5.469

2.  Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus.

Authors:  P M Leonard; S H Smits; S E Sedelnikova; A B Brinkman; W M de Vos; J van der Oost; D W Rice; J B Rafferty
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

3.  A thermostable platform for transcriptional regulation: the DNA-binding properties of two Lrp homologs from the hyperthermophilic archaeon Methanococcus jannaschii.

Authors:  M Ouhammouch; E P Geiduschek
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

4.  Characterization of LrpC DNA-binding properties and regulation of Bacillus subtilis lrpC gene expression.

Authors:  C Beloin; R Exley; A L Mahé; M Zouine; S Cubasch; F Le Hégarat
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

5.  Pushing the boundaries of molecular replacement with maximum likelihood.

Authors:  R J Read
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

6.  Leucine-regulated self-association of leucine-responsive regulatory protein (Lrp) from Escherichia coli.

Authors:  S Chen; M H Rosner; J M Calvo
Journal:  J Mol Biol       Date:  2001-09-28       Impact factor: 5.469

7.  The Sulfolobus solfataricus Lrp-like protein LysM regulates lysine biosynthesis in response to lysine availability.

Authors:  Arie B Brinkman; Stephen D Bell; Robert Jan Lebbink; Willem M de Vos; John van der Oost
Journal:  J Biol Chem       Date:  2002-05-31       Impact factor: 5.157

Review 8.  The Lrp family of transcriptional regulators.

Authors:  Arie B Brinkman; Thijs J G Ettema; Willem M de Vos; John van der Oost
Journal:  Mol Microbiol       Date:  2003-04       Impact factor: 3.501

9.  A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes.

Authors:  Thijs J G Ettema; Arie B Brinkman; Travis H Tani; John B Rafferty; John Van Der Oost
Journal:  J Biol Chem       Date:  2002-07-23       Impact factor: 5.157

10.  Activation of archaeal transcription by recruitment of the TATA-binding protein.

Authors:  Mohamed Ouhammouch; Robert E Dewhurst; Winfried Hausner; Michael Thomm; E Peter Geiduschek
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-11       Impact factor: 11.205

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  1 in total

1.  Nanobody(R)-based chromatin immunoprecipitation/micro-array analysis for genome-wide identification of transcription factor DNA binding sites.

Authors:  Trong Nguyen-Duc; Eveline Peeters; Serge Muyldermans; Daniel Charlier; Gholamreza Hassanzadeh-Ghassabeh
Journal:  Nucleic Acids Res       Date:  2012-12-28       Impact factor: 16.971

  1 in total

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