Literature DB >> 16511196

X-ray diffraction analysis and molecular-replacement solution of the cyan fluorescent protein dsFP483.

Meitian Wang1, Hetal N Patel, Rebekka M Wachter.   

Abstract

A novel cyan fluorescent protein, dsFP483 from the coral Discosoma striata, has been crystallized. Diffraction data were collected to 2.1 A and processed in space group C2. Molecular-replacement methods were applied using the closely related red fluorescent protein DsRed as a search model. The asymmetric unit appears to contain six protein molecules (1.5 tetramers), five of which (83%) could be located by the molecular-replacement searches.

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Year:  2005        PMID: 16511196      PMCID: PMC1991309          DOI: 10.1107/S1744309105028502

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  15 in total

1.  Fluorescent proteins from nonbioluminescent Anthozoa species.

Authors:  M V Matz; A F Fradkov; Y A Labas; A P Savitsky; A G Zaraisky; M L Markelov; S A Lukyanov
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

2.  XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density.

Authors:  D E McRee
Journal:  J Struct Biol       Date:  1999 Apr-May       Impact factor: 2.867

3.  The structural basis for red fluorescence in the tetrameric GFP homolog DsRed.

Authors:  M A Wall; M Socolich; R Ranganathan
Journal:  Nat Struct Biol       Date:  2000-12

4.  Negotiating the speed bumps to fluorescence.

Authors:  S James Remington
Journal:  Nat Biotechnol       Date:  2002-01       Impact factor: 54.908

5.  Macromolecular TLS refinement in REFMAC at moderate resolutions.

Authors:  Martyn D Winn; Garib N Murshudov; Miroslav Z Papiz
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

6.  The crystal structure of the Y66L variant of green fluorescent protein supports a cyclization-oxidation-dehydration mechanism for chromophore maturation.

Authors:  Matthew A Rosenow; Holly A Huffman; Marlene E Phail; Rebekka M Wachter
Journal:  Biochemistry       Date:  2004-04-20       Impact factor: 3.162

7.  An improved cyan fluorescent protein variant useful for FRET.

Authors:  Mark A Rizzo; Gerald H Springer; Butch Granada; David W Piston
Journal:  Nat Biotechnol       Date:  2004-02-29       Impact factor: 54.908

Review 8.  The molecular properties and applications of Anthozoa fluorescent proteins and chromoproteins.

Authors:  Vladislav V Verkhusha; Konstantin A Lukyanov
Journal:  Nat Biotechnol       Date:  2004-03       Impact factor: 54.908

9.  Refined crystal structure of DsRed, a red fluorescent protein from coral, at 2.0-A resolution.

Authors:  D Yarbrough; R M Wachter; K Kallio; M V Matz; S J Remington
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-16       Impact factor: 11.205

10.  zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore.

Authors:  S James Remington; Rebekka M Wachter; Daniel K Yarbrough; Bruce Branchaud; D C Anderson; Karen Kallio; Konstantin A Lukyanov
Journal:  Biochemistry       Date:  2005-01-11       Impact factor: 3.162

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  2 in total

Review 1.  Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.

Authors:  Gabor Mocz
Journal:  Mar Biotechnol (NY)       Date:  2007-03-19       Impact factor: 3.619

2.  Crystal structure and Raman studies of dsFP483, a cyan fluorescent protein from Discosoma striata.

Authors:  Gabrielle D Malo; Meitian Wang; Di Wu; Allison L Stelling; Peter J Tonge; Rebekka M Wachter
Journal:  J Mol Biol       Date:  2008-03-19       Impact factor: 5.469

  2 in total

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