Literature DB >> 16511131

Cloning, purification, crystallization and preliminary X-ray analysis of XC229, a conserved hypothetical protein from Xanthomonas campestris.

Ko-Hsin Chin1, Wei-Tien Kuo, Chia-Cheng Chou, Hui-Lin Shr, Ping-Chiang Lyu, Andrew H-J Wang, Shan-Ho Chou.   

Abstract

Xanthomonas campestris pv. campestris is a Gram-negative yellow-pigmented pathogenic bacterium that causes black rot, one of the major worldwide diseases of cruciferous crops. Its genome contains approximately 4500 genes, roughly one third of which have no known structure and/or function. However, some of these unknown genes are highly conserved among several different bacterial genuses. XC229 is one such protein containing 134 amino acids. It was overexpressed in Escherichia coli, purified and crystallized using the hanging-drop vapour-diffusion method. The crystal diffracted to a resolution of at least 1.80 A. It is cubic and belongs to space group I2(x)3, with unit-cell parameters a = b = c = 106.8 A. It contains one or two molecules per asymmetric unit.

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Year:  2005        PMID: 16511131      PMCID: PMC1952452          DOI: 10.1107/S1744309105018944

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

1.  The Pfam protein families database.

Authors:  A Bateman; E Birney; R Durbin; S R Eddy; K L Howe; E L Sonnhammer
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Genome sequence of the plant pathogen Ralstonia solanacearum.

Authors:  M Salanoubat; S Genin; F Artiguenave; J Gouzy; S Mangenot; M Arlat; A Billault; P Brottier; J C Camus; L Cattolico; M Chandler; N Choisne; C Claudel-Renard; S Cunnac; N Demange; C Gaspin; M Lavie; A Moisan; C Robert; W Saurin; T Schiex; P Siguier; P Thébault; M Whalen; P Wincker; M Levy; J Weissenbach; C A Boucher
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

3.  Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus.

Authors:  Dong Hae Shin; Hisao Yokota; Rosalind Kim; Sung-Hou Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

4.  Inference of protein function from protein structure.

Authors:  Debnath Pal; David Eisenberg
Journal:  Structure       Date:  2005-01       Impact factor: 5.006

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  [25] Overview of isomorphous replacement phasing.

Authors:  Hengming Ke
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.

Authors:  C K Stover; X Q Pham; A L Erwin; S D Mizoguchi; P Warrener; M J Hickey; F S Brinkman; W O Hufnagle; D J Kowalik; M Lagrou; R L Garber; L Goltry; E Tolentino; S Westbrock-Wadman; Y Yuan; L L Brody; S N Coulter; K R Folger; A Kas; K Larbig; R Lim; K Smith; D Spencer; G K Wong; Z Wu; I T Paulsen; J Reizer; M H Saier; R E Hancock; S Lory; M V Olson
Journal:  Nature       Date:  2000-08-31       Impact factor: 49.962

8.  Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

Authors:  A C R da Silva; J A Ferro; F C Reinach; C S Farah; L R Furlan; R B Quaggio; C B Monteiro-Vitorello; M A Van Sluys; N F Almeida; L M C Alves; A M do Amaral; M C Bertolini; L E A Camargo; G Camarotte; F Cannavan; J Cardozo; F Chambergo; L P Ciapina; R M B Cicarelli; L L Coutinho; J R Cursino-Santos; H El-Dorry; J B Faria; A J S Ferreira; R C C Ferreira; M I T Ferro; E F Formighieri; M C Franco; C C Greggio; A Gruber; A M Katsuyama; L T Kishi; R P Leite; E G M Lemos; M V F Lemos; E C Locali; M A Machado; A M B N Madeira; N M Martinez-Rossi; E C Martins; J Meidanis; C F M Menck; C Y Miyaki; D H Moon; L M Moreira; M T M Novo; V K Okura; M C Oliveira; V R Oliveira; H A Pereira; A Rossi; J A D Sena; C Silva; R F de Souza; L A F Spinola; M A Takita; R E Tamura; E C Teixeira; R I D Tezza; M Trindade dos Santos; D Truffi; S M Tsai; F F White; J C Setubal; J P Kitajima
Journal:  Nature       Date:  2002-05-23       Impact factor: 49.962

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  High-throughput screening of soluble recombinant proteins.

Authors:  Yan-Ping Shih; Wen-Mei Kung; Jui-Chuan Chen; Chia-Hui Yeh; Andrew H-J Wang; Ting-Fang Wang
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

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