Literature DB >> 16511096

Crystallization and preliminary X-ray diffraction studies of the cysteine protease ervatamin A from Ervatamia coronaria.

Sibani Chakraborty1, Sampa Biswas, Chandana Chakrabarti, Jiban K Dattagupta.   

Abstract

The ervatamins are highly stable cysteine proteases that are present in the latex of the medicinal plant Ervatamia coronaria and belong to the papain family, members of which share similar amino-acid sequences and also a similar fold comprising two domains. Ervatamin A from this family, a highly active protease compared with others from the same source, has been purified to homogeneity by ion-exchange chromatography and crystallized by the vapour-diffusion method. Needle-shaped crystals of ervatamin A diffract to 2.1 A resolution and belong to space group C222(1), with unit-cell parameters a = 31.10, b = 144.17, c = 108.61 A. The solvent content using an ervatamin A molecular weight of 27.6 kDa is 43.9%, with a VM value of 2.19 A3 Da(-1) assuming one protein molecule in the asymmetric unit. A molecular-replacement solution has been found using the structure of ervatamin C as a search model.

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Year:  2005        PMID: 16511096      PMCID: PMC1952322          DOI: 10.1107/S174430910501657X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  10 in total

1.  Purification and characterization of a stable cysteine protease ervatamin B, with two disulfide bridges, from the latex of Ervatamia coronaria.

Authors:  S Kundu; M Sundd; M V Jagannadham
Journal:  J Agric Food Chem       Date:  2000-02       Impact factor: 5.279

2.  Purification and biochemical characterization of a highly active cysteine protease ervatamin A from the latex of Ervatamia coronaria.

Authors:  Sreedevi Nallamsetty; Suman Kundu; Medicherla V Jagannadham
Journal:  J Protein Chem       Date:  2003-01

3.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

Review 4.  A cut above the rest: the regulatory function of plant proteases.

Authors:  Andreas Schaller
Journal:  Planta       Date:  2004-10-29       Impact factor: 4.116

5.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

6.  Structure of papain.

Authors:  J Drenth; J N Jansonius; R Koekoek; H M Swen; B G Wolthers
Journal:  Nature       Date:  1968-06-08       Impact factor: 49.962

7.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

8.  Crystallization and preliminary X-ray analysis of ervatamin B and C, two thiol proteases from Ervatamia coronaria.

Authors:  C Chakrabarti; S Biswas; S Kundu; M Sundd; M V Jagannadham; J K Dattagupta
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-05

9.  Proposed amino acid sequence and the 1.63 A X-ray crystal structure of a plant cysteine protease, ervatamin B: some insights into the structural basis of its stability and substrate specificity.

Authors:  Sampa Biswas; Chandana Chakrabarti; Suman Kundu; Medicherla V Jagannadham; Jiban K Dattagupta
Journal:  Proteins       Date:  2003-06-01

10.  Structural basis of the unusual stability and substrate specificity of ervatamin C, a plant cysteine protease from Ervatamia coronaria.

Authors:  Piyali Guha Thakurta; Sampa Biswas; Chandana Chakrabarti; Monica Sundd; Medicherla V Jagannadham; Jiban K Dattagupta
Journal:  Biochemistry       Date:  2004-02-17       Impact factor: 3.162

  10 in total

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