Literature DB >> 16511025

Crystallization and preliminary X-ray analysis of Thermoactinomyces vulgaris R-47 maltooligosaccharide-metabolizing enzyme homologous to glucoamylase.

Kazuhiro Ichikawa1, Takashi Tonozuka, Masahiro Mizuno, Yoshihiro Tanabe, Shigehiro Kamitori, Atsushi Nishikawa, Yoshiyuki Sakano.   

Abstract

A maltooligosaccharide-metabolizing enzyme from Thermoactinomyces vulgaris R-47 (TGA) homologous to glucoamylase degrades maltooligosaccharides more efficiently than starch, unlike fungal glucoamylases. TGA was crystallized and the state of the protein in solution was analyzed by gel-filtration chromatography. Diffraction data were collected to 3.31 A resolution. The TGA crystal belongs to the orthorhombic space group P2(1)2(1)2(1) or P2(1)2(1)2, with unit-cell parameters a = 110.2, b = 317.6, c = 144.9 A, and is expected to contain five to eight TGA molecules per asymmetric unit. Gel-filtration and native PAGE analyses indicated that TGA exists as a dimer in solution. This is the first report of the crystallization of an oligomeric glucoamylase.

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Year:  2005        PMID: 16511025      PMCID: PMC1952275          DOI: 10.1107/S1744309105003842

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

Review 1.  Glucoamylase: structure/function relationships, and protein engineering.

Authors:  J Sauer; B W Sigurskjold; U Christensen; T P Frandsen; E Mirgorodskaya; M Harrison; P Roepstorff; B Svensson
Journal:  Biochim Biophys Acta       Date:  2000-12-29

2.  Crystal structure and evolution of a prokaryotic glucoamylase.

Authors:  Alexander E Aleshin; Ping-Hua Feng; Richard B Honzatko; Peter J Reilly
Journal:  J Mol Biol       Date:  2003-03-14       Impact factor: 5.469

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Authors:  L ORNSTEIN
Journal:  Ann N Y Acad Sci       Date:  1964-12-28       Impact factor: 5.691

4.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

5.  Crystal structure of glucoamylase from Aspergillus awamori var. X100 to 2.2-A resolution.

Authors:  A Aleshin; A Golubev; L M Firsov; R B Honzatko
Journal:  J Biol Chem       Date:  1992-09-25       Impact factor: 5.157

6.  Novel glucoamylase-type enzymes from Thermoactinomyces vulgaris and Methanococcus jannaschii whose genes are found in the flanking region of the alpha-amylase genes.

Authors:  R Uotsu-Tomita; T Tonozuka; H Sakai; Y Sakano
Journal:  Appl Microbiol Biotechnol       Date:  2001-08       Impact factor: 4.813

7.  Crystal structure of maltose phosphorylase from Lactobacillus brevis: unexpected evolutionary relationship with glucoamylases.

Authors:  M P Egloff; J Uppenberg; L Haalck; H van Tilbeurgh
Journal:  Structure       Date:  2001-08       Impact factor: 5.006

8.  Properties of a novel thermostable glucoamylase from the hyperthermophilic archaeon Sulfolobus solfataricus in relation to starch processing.

Authors:  Mi-Sun Kim; Jong-Tae Park; Young-Wan Kim; Hee-Seob Lee; Rose Nyawira; Hyoun-Seung Shin; Cheon-Seok Park; Sang-Ho Yoo; Yong-Ro Kim; Tae-Wha Moon; Kwan-Hwa Park
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

9.  Structural insights into substrate specificity and function of glucodextranase.

Authors:  Masahiro Mizuno; Takashi Tonozuka; Saori Suzuki; Rie Uotsu-Tomita; Shigehiro Kamitori; Atsushi Nishikawa; Yoshiyuki Sakano
Journal:  J Biol Chem       Date:  2003-12-01       Impact factor: 5.157

10.  Purification, characterization, and subsite affinities of Thermoactinomyces vulgaris R-47 maltooligosaccharide-metabolizing enzyme homologous to glucoamylases.

Authors:  Kazuhiro Ichikawa; Takashi Tonozuka; Rie Uotsu-Tomita; Hiromi Akeboshi; Atsushi Nishikawa; Yoshiyuki Sakano
Journal:  Biosci Biotechnol Biochem       Date:  2004-02       Impact factor: 2.043

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