Literature DB >> 16511023

Crystallization and preliminary X-ray analysis of the mRNA-binding domain of elongation factor SelB in complex with RNA.

Linda Rasubala1, Dominique Fourmy, Toyoyuki Ose, Daisuke Kohda, Katsumi Maenaka, Satoko Yoshizawa.   

Abstract

In bacteria, the selenocysteine-specific elongation factor SelB is necessary for incorporation of selenocysteine, the 21st amino acid, into proteins by the ribosome. SelB binds to an mRNA hairpin formed by the selenocysteine-insertion sequence (SECIS) and delivers selenocysteyl-tRNA (Sec-tRNASec) at the ribosomal A site. The minimum fragment (residues 512-634) of Moorella thermoacetica SelB (SelB-M) required for mRNA binding has been overexpressed and purified. The complex of SelB-M with 23 nucleotides of the SECIS mRNA hairpin was crystallized at 293 K using the hanging-drop vapour-diffusion or oil-batch methods. The crystals diffract to 2.3 A resolution using SPring-8 BL41XU and belong to the space group P2(1)2(1)2, with unit-cell parameters a = 81.69, b = 169.58, c = 71.69 A.

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Year:  2005        PMID: 16511023      PMCID: PMC1952284          DOI: 10.1107/S1744309105003611

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  8 in total

Review 1.  Winged helix proteins.

Authors:  K S Gajiwala; S K Burley
Journal:  Curr Opin Struct Biol       Date:  2000-02       Impact factor: 6.809

2.  Structure of prokaryotic SECIS mRNA hairpin and its interaction with elongation factor SelB.

Authors:  Dominique Fourmy; Eric Guittet; Satoko Yoshizawa
Journal:  J Mol Biol       Date:  2002-11-15       Impact factor: 5.469

3.  Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB.

Authors:  M Selmer; X-D Su
Journal:  EMBO J       Date:  2002-08-01       Impact factor: 11.598

4.  Structural basis for mRNA recognition by elongation factor SelB.

Authors:  Satoko Yoshizawa; Linda Rasubala; Toyoyuki Ose; Daisuke Kohda; Dominique Fourmy; Katsumi Maenaka
Journal:  Nat Struct Mol Biol       Date:  2005-01-23       Impact factor: 15.369

5.  Identification of a novel translation factor necessary for the incorporation of selenocysteine into protein.

Authors:  K Forchhammer; W Leinfelder; A Böck
Journal:  Nature       Date:  1989-11-23       Impact factor: 49.962

6.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  Domain structure of the prokaryotic selenocysteine-specific elongation factor SelB.

Authors:  M Kromayer; R Wilting; P Tormay; A Böck
Journal:  J Mol Biol       Date:  1996-10-04       Impact factor: 5.469

8.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

  8 in total

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