Literature DB >> 16511022

Crystallization and preliminary X-ray diffraction study of thermostable RNase HIII from Bacillus stearothermophilus.

Hyongi Chon1, Hiroyoshi Matsumura, Yuichi Koga, Kazufumi Takano, Shigenori Kanaya.   

Abstract

A thermostable ribonuclease HIII from Bacillus stearothermophilus (Bst RNase HIII) was crystallized and preliminary crystallographic studies were performed. Plate-like overlapping polycrystals were grown by the sitting-drop vapour-diffusion method at 283 K. Native X-ray diffraction data were collected to 2.8 A resolution using synchrotron radiation from station BL44XU at SPring-8. The crystals belong to the orthorhombic space group P2(1)2(1)2, with unit-cell parameters a = 66.73, b = 108.62, c = 48.29 A. Assuming one molecule per asymmetric unit, the VM value was 2.59 A3 Da(-1) and the solvent content was 52.2%.

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Year:  2005        PMID: 16511022      PMCID: PMC1952286          DOI: 10.1107/S1744309105003659

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  19 in total

1.  Structural biochemistry of a type 2 RNase H: RNA primer recognition and removal during DNA replication.

Authors:  B R Chapados; Q Chai; D J Hosfield; J Qiu; B Shen; J A Tainer
Journal:  J Mol Biol       Date:  2001-03-23       Impact factor: 5.469

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Authors:  N Ohtani; M Haruki; M Morikawa; S Kanaya
Journal:  J Biosci Bioeng       Date:  1999       Impact factor: 2.894

3.  Crystal structure of archaeal RNase HII: a homologue of human major RNase H.

Authors:  L Lai; H Yokota; L W Hung; R Kim; S H Kim
Journal:  Structure       Date:  2000-08-15       Impact factor: 5.006

4.  Excision of misincorporated ribonucleotides in DNA by RNase H (type 2) and FEN-1 in cell-free extracts.

Authors:  Bjorn Rydberg; John Game
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-10       Impact factor: 11.205

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Saccharomyces cerevisiae RNase H(35) functions in RNA primer removal during lagging-strand DNA synthesis, most efficiently in cooperation with Rad27 nuclease.

Authors:  J Qiu; Y Qian; P Frank; U Wintersberger; B Shen
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

8.  Three-dimensional structure of ribonuclease H from E. coli.

Authors:  K Katayanagi; M Miyagawa; M Matsushima; M Ishikawa; S Kanaya; M Ikehara; T Matsuzaki; K Morikawa
Journal:  Nature       Date:  1990-09-20       Impact factor: 49.962

9.  Structure of ribonuclease H phased at 2 A resolution by MAD analysis of the selenomethionyl protein.

Authors:  W Yang; W A Hendrickson; R J Crouch; Y Satow
Journal:  Science       Date:  1990-09-21       Impact factor: 47.728

10.  Identification of single Mn(2+) binding sites required for activation of the mutant proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray crystallography.

Authors:  Yasuo Tsunaka; Kazufumi Takano; Hiroyoshi Matsumura; Yuriko Yamagata; Shigenori Kanaya
Journal:  J Mol Biol       Date:  2004-12-16       Impact factor: 5.469

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  1 in total

1.  Purification and crystallization of RNase HIII from Staphylococcus aureus.

Authors:  Scott A Reiling; Kohei Homma; Oluwatoyin A Asojo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-22
  1 in total

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