Literature DB >> 16511021

Crystallization and preliminary X-ray analysis of reducing-end xylose-releasing exo-oligoxylanase from Bacillus halodurans C-125.

Yuji Honda1, Shinya Fushinobu, Masafumi Hidaka, Takayoshi Wakagi, Hirofumi Shoun, Motomitsu Kitaoka.   

Abstract

The reducing-end xylose-releasing exo-oligoxylanase (Rex) from Bacillus halodurans C-125, a novel family GH8 glycoside hydrolase, was crystallized by the hanging-drop vapour-diffusion method using 13.6 mg ml(-1) purified Rex, 5.6%(v/v) polyethylene glycol 4000, 70 mM sodium acetate pH 4.6 and 30%(v/v) glycerol. Suitable crystals grew after incubation for 5 d at 293 K. The crystals belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 52.69, b = 86.02, c = 87.92 A. X-ray diffraction data were collected at a resolution of 1.35 A.

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Year:  2005        PMID: 16511021      PMCID: PMC1952294          DOI: 10.1107/S1744309105003635

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

Review 1.  Glycoside hydrolases and glycosyltransferases: families and functional modules.

Authors:  Y Bourne; B Henrissat
Journal:  Curr Opin Struct Biol       Date:  2001-10       Impact factor: 6.809

2.  The structure of a cold-adapted family 8 xylanase at 1.3 A resolution. Structural adaptations to cold and investgation of the active site.

Authors:  Filip Van Petegem; Tony Collins; Marie-Alice Meuwis; Charles Gerday; Georges Feller; Jozef Van Beeumen
Journal:  J Biol Chem       Date:  2002-12-09       Impact factor: 5.157

3.  The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.

Authors:  Beatriz G Guimarães; Hélène Souchon; Betsy L Lytle; J H David Wu; Pedro M Alzari
Journal:  J Mol Biol       Date:  2002-07-12       Impact factor: 5.469

4.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

5.  A classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat
Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

6.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  Atomic (0.94 A) resolution structure of an inverting glycosidase in complex with substrate.

Authors:  Diego M A Guérin; Marie-Bernard Lascombe; Marcelo Costabel; Hélène Souchon; Victor Lamzin; Pierre Béguin; Pedro M Alzari
Journal:  J Mol Biol       Date:  2002-03-08       Impact factor: 5.469

8.  A family 8 glycoside hydrolase from Bacillus halodurans C-125 (BH2105) is a reducing end xylose-releasing exo-oligoxylanase.

Authors:  Yuji Honda; Motomitsu Kitaoka
Journal:  J Biol Chem       Date:  2004-10-18       Impact factor: 5.157

9.  Crystal structure of family GH-8 chitosanase with subclass II specificity from Bacillus sp. K17.

Authors:  Wataru Adachi; Yuri Sakihama; Shinji Shimizu; Tomoko Sunami; Tetsuya Fukazawa; Mamie Suzuki; Rie Yatsunami; Satoshi Nakamura; Akio Takénaka
Journal:  J Mol Biol       Date:  2004-10-22       Impact factor: 5.469

10.  A novel family 8 xylanase, functional and physicochemical characterization.

Authors:  Tony Collins; Marie-Alice Meuwis; Ingeborg Stals; Marc Claeyssens; Georges Feller; Charles Gerday
Journal:  J Biol Chem       Date:  2002-06-27       Impact factor: 5.157

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