Literature DB >> 16508090

Purification, crystallization and preliminary crystallographic analysis of the vacuole-type ATPase subunit E from Pyrococcus horikoshii OT3.

Neratur K Lokanath1, Yoko Ukita, Mitsuaki Sugahara, Naoki Kunishima.   

Abstract

The vacuole-type ATPases in eukaryotic cells translocate protons across various biological membranes including the vacuolar membrane by consuming ATP molecules. The E subunit of the multisubunit complex V-ATPase from Pyrococcus horikoshii OT3, which has a molecular weight of 22.88 kDa, has been cloned, overexpressed in Escherichia coli, purified and crystallized by the microbatch method using PEG 4000 as a precipitant at 296 K. A data set to 1.85 A resolution with 98.8% completeness and an Rmerge of 6.5% was collected from a single flash-cooled crystal using synchrotron radiation. The crystal belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 52.196, b = 55.317, c = 77.481 A, and is most likely to contain one molecule per asymmetric unit.

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Year:  2004        PMID: 16508090      PMCID: PMC1952376          DOI: 10.1107/S1744309104026430

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  V-Type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon.

Authors:  K Yokoyama; S Ohkuma; H Taguchi; T Yasunaga; T Wakabayashi; M Yoshida
Journal:  J Biol Chem       Date:  2000-05-05       Impact factor: 5.157

2.  Evidence for major structural changes in the Manduca sexta midgut V1 ATPase due to redox modulation. A small angle X-ray scattering study.

Authors:  G Grüber; D I Svergun; J Godovac-Zimmermann; W R Harvey; H Wieczorek; M H Koch
Journal:  J Biol Chem       Date:  2000-09-29       Impact factor: 5.157

Review 3.  ATP synthase--a marvellous rotary engine of the cell.

Authors:  M Yoshida; E Muneyuki; T Hisabori
Journal:  Nat Rev Mol Cell Biol       Date:  2001-09       Impact factor: 94.444

Review 4.  The vacuolar (H+)-ATPases--nature's most versatile proton pumps.

Authors:  Tsuyoshi Nishi; Michael Forgac
Journal:  Nat Rev Mol Cell Biol       Date:  2002-02       Impact factor: 94.444

5.  Rotation of the proteolipid ring in the V-ATPase.

Authors:  Ken Yokoyama; Masahiro Nakano; Hiromi Imamura; Masasuke Yoshida; Masatada Tamakoshi
Journal:  J Biol Chem       Date:  2003-04-21       Impact factor: 5.157

6.  Evidence for rotation of V1-ATPase.

Authors:  Hiromi Imamura; Masahiro Nakano; Hiroyuki Noji; Eiro Muneyuki; Shoji Ohkuma; Masasuke Yoshida; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-21       Impact factor: 11.205

Review 7.  [Development of high-throughput automatic protein crystallization and observation system].

Authors:  Mitsuaki Sugahara; Masashi Miyano
Journal:  Tanpakushitsu Kakusan Koso       Date:  2002-06

8.  Subunit arrangement in V-ATPase from Thermus thermophilus.

Authors:  Ken Yokoyama; Koji Nagata; Hiromi Imamura; Shoji Ohkuma; Masasuke Yoshida; Masatada Tamakoshi
Journal:  J Biol Chem       Date:  2003-08-11       Impact factor: 5.157

9.  Composition of the central stalk of the Na+-pumping V-ATPase from Caloramator fervidus.

Authors:  Yuriy Chaban; Trees Ubbink-Kok; Wilko Keegstra; Juke S Lolkema; Egbert J Boekema
Journal:  EMBO Rep       Date:  2002-09-13       Impact factor: 8.807

10.  Cysteine-directed cross-linking to subunit B suggests that subunit E forms part of the peripheral stalk of the vacuolar H+-ATPase.

Authors:  Yoichiro Arata; James D Baleja; Michael Forgac
Journal:  J Biol Chem       Date:  2001-11-27       Impact factor: 5.157

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