Literature DB >> 16507784

qPCR-DAMS: a database tool to analyze, manage, and store both relative and absolute quantitative real-time PCR data.

Nili Jin1, Keyu He, Lin Liu.   

Abstract

Quantitative real-time PCR is an important high-throughput method in the biomedical sciences. However, existing software has limitations in handling both relative and absolute quantification. We designed quantitative PCR data analysis and management system (qPCR-DAMS), a database tool based on Access 2003, to deal with such shortcomings by the addition of integrated mathematical procedures. qPCR-DAMS allows a user to choose among four methods for data processing within a single software package: 1) ratio relative quantification, 2) absolute level, 3) normalized absolute expression, and 4) ratio absolute quantification. qPCR-DAMS also provides a tool for multiple reference gene normalization. qPCR-DAMS has three quality control steps and a data display system to monitor data variation. In summary, qPCR-DAMS is a handy tool for real-time PCR users.

Mesh:

Year:  2006        PMID: 16507784     DOI: 10.1152/physiolgenomics.00233.2005

Source DB:  PubMed          Journal:  Physiol Genomics        ISSN: 1094-8341            Impact factor:   3.107


  2 in total

Review 1.  A survey of tools for the analysis of quantitative PCR (qPCR) data.

Authors:  Stephan Pabinger; Stefan Rödiger; Albert Kriegner; Klemens Vierlinger; Andreas Weinhäusel
Journal:  Biomol Detect Quantif       Date:  2014-09-06

2.  QPCR: Application for real-time PCR data management and analysis.

Authors:  Stephan Pabinger; Gerhard G Thallinger; René Snajder; Heiko Eichhorn; Robert Rader; Zlatko Trajanoski
Journal:  BMC Bioinformatics       Date:  2009-08-27       Impact factor: 3.169

  2 in total

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