Literature DB >> 16506097

Composition and formation of heterochromatin in Arabidopsis thaliana.

P Fransz1, R ten Hoopen, F Tessadori.   

Abstract

The term heterochromatin has been applied to both large-scale, microscopically visible chromocentres and small-scale, silent genes located outside chromocentres. This may cause confusion in the interpretation of epigenetic marks for both features. The model plant Arabidopsis thaliana provides an excellent system to investigate composition and function of chromatin states at different levels of organization. In this review we will discuss recent developments in molecular networks underlying gene silencing and the relationship with visible heterochromatin in Arabidopsis.

Entities:  

Mesh：

Substances：

Year:  2006        PMID： 16506097     DOI： 10.1007/s10577-005-1022-5

Source DB:  PubMed          Journal:  Chromosome Res        ISSN： 0967-3849            Impact factor:   5.239


  55 in total

1.  The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene.

Authors:  W J Soppe; S E Jacobsen; C Alonso-Blanco; J P Jackson; T Kakutani; M Koornneef; A J Peeters
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

2.  Partitioning and plasticity of repressive histone methylation states in mammalian chromatin.

Authors:  Antoine H F M Peters; Stefan Kubicek; Karl Mechtler; Roderick J O'Sullivan; Alwin A H A Derijck; Laura Perez-Burgos; Alexander Kohlmaier; Susanne Opravil; Makoto Tachibana; Yoichi Shinkai; Joost H A Martens; Thomas Jenuwein
Journal:  Mol Cell       Date:  2003-12       Impact factor: 17.970

Review 3.  Plant chromatin -- epigenetics linked to ATP-dependent remodeling and architectural proteins.

Authors:  Jan Brzeski; Andrzej Jerzmanowski
Journal:  FEBS Lett       Date:  2004-06-01       Impact factor: 4.124

Review 4.  Cytogenetics as a tool to study gene regulation.

Authors:  Federico Tessadori; Roel van Driel; Paul Fransz
Journal:  Trends Plant Sci       Date:  2004-03       Impact factor: 18.313

5.  Atypical RNA polymerase subunits required for RNA-directed DNA methylation.

Authors:  Tatsuo Kanno; Bruno Huettel; M Florian Mette; Werner Aufsatz; Estelle Jaligot; Lucia Daxinger; David P Kreil; Marjori Matzke; Antonius J M Matzke
Journal:  Nat Genet       Date:  2005-05-29       Impact factor: 38.330

6.  Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

Authors:  B H Ramsahoye; D Biniszkiewicz; F Lyko; V Clark; A P Bird; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

7.  The role of MET1 in RNA-directed de novo and maintenance methylation of CG dinucleotides.

Authors:  Werner Aufsatz; M Florian Mette; Antonius J M Matzke; Marjori Matzke
Journal:  Plant Mol Biol       Date:  2004-04       Impact factor: 4.076

8.  BRU1, a novel link between responses to DNA damage and epigenetic gene silencing in Arabidopsis.

Authors:  Shin Takeda; Zerihun Tadele; Ingo Hofmann; Aline V Probst; Karel J Angelis; Hidetaka Kaya; Takashi Araki; Tesfaye Mengiste; Ortrun Mittelsten Scheid; Kei-ichi Shibahara; Dierk Scheel; Jerzy Paszkowski
Journal:  Genes Dev       Date:  2004-04-01       Impact factor: 11.361

9.  Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin.

Authors:  Bernhard Lehnertz; Yoshihide Ueda; Alwin A H A Derijck; Ulrich Braunschweig; Laura Perez-Burgos; Stefan Kubicek; Taiping Chen; En Li; Thomas Jenuwein; Antoine H F M Peters
Journal:  Curr Biol       Date:  2003-07-15       Impact factor: 10.834

10.  FASCIATA genes for chromatin assembly factor-1 in arabidopsis maintain the cellular organization of apical meristems.

Authors:  H Kaya; K I Shibahara; K I Taoka; M Iwabuchi; B Stillman; T Araki
Journal:  Cell       Date:  2001-01-12       Impact factor: 41.582
View more
  32 in total

1.  Large-scale chromatin de-compaction induced by low light is not accompanied by nucleosomal displacement.

Authors:  Martijn van Zanten; Federico Tessadori; Laurens Bossen; Anton J M Peeters; Paul Fransz
Journal:  Plant Signal Behav       Date:  2010-12-01

2.  Different types of plant chromatin associated with modified histones H3 and H4 and methylated DNA.

Authors:  Lidiane Feitoza; Marcelo Guerra
Journal:  Genetica       Date:  2011-02-15       Impact factor: 1.082

3.  Spatial relationship between chromosomal domains in diploid and autotetraploid Arabidopsis thaliana nuclei.

Authors:  H Sas-Nowosielska; T Bernas
Journal:  Nucleus       Date:  2016-04-25       Impact factor: 4.197

4.  Non-random chromosome arrangement in triploid endosperm nuclei.

Authors:  Célia Baroux; Ales Pecinka; Jörg Fuchs; Gregor Kreth; Ingo Schubert; Ueli Grossniklaus
Journal:  Chromosoma       Date:  2016-02-19       Impact factor: 4.316

5.  Heterochromatin, small RNA and post-fertilization dysgenesis in allopolyploid and interploid hybrids of Arabidopsis.

Authors:  Robert A Martienssen
Journal:  New Phytol       Date:  2010-04       Impact factor: 10.151

6.  Photoreceptors CRYTOCHROME2 and phytochrome B control chromatin compaction in Arabidopsis.

Authors:  Martijn van Zanten; Federico Tessadori; Fionn McLoughlin; Reuben Smith; Frank F Millenaar; Roel van Driel; Laurentius A C J Voesenek; Anton J M Peeters; Paul Fransz
Journal:  Plant Physiol       Date:  2010-10-08       Impact factor: 8.340

7.  Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state.

Authors:  Tae-Jin Lee; Pete E Pascuzzi; Sharon B Settlage; Randall W Shultz; Milos Tanurdzic; Pablo D Rabinowicz; Margit Menges; Ping Zheng; Dorrie Main; James A H Murray; Bryon Sosinski; George C Allen; Robert A Martienssen; Linda Hanley-Bowdoin; Matthew W Vaughn; William F Thompson
Journal:  PLoS Genet       Date:  2010-06-10       Impact factor: 5.917

8.  Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize.

Authors:  Wenli Zhang; Hye-Ran Lee; Dal-Hoe Koo; Jiming Jiang
Journal:  Plant Cell       Date:  2008-01-31       Impact factor: 11.277

9.  The triploid endosperm genome of Arabidopsis adopts a peculiar, parental-dosage-dependent chromatin organization.

Authors:  Célia Baroux; Ales Pecinka; Jörg Fuchs; Ingo Schubert; Ueli Grossniklaus
Journal:  Plant Cell       Date:  2007-06-08       Impact factor: 11.277

10.  Phytochrome B and histone deacetylase 6 control light-induced chromatin compaction in Arabidopsis thaliana.

Authors:  Federico Tessadori; Martijn van Zanten; Penka Pavlova; Rachel Clifton; Frédéric Pontvianne; L Basten Snoek; Frank F Millenaar; Roeland Kees Schulkes; Roel van Driel; Laurentius A C J Voesenek; Charles Spillane; Craig S Pikaard; Paul Fransz; Anton J M Peeters
Journal:  PLoS Genet       Date:  2009-09-04       Impact factor: 5.917
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.