Literature DB >> 16505961

Rapid preparation of stable isotope labeled peptides that bind to target proteins by a phage library system.

Yumiko Mizukoshi1, Hideo Takahashi, Ichio Shimada.   

Abstract

We have developed a system for directly isolating foreign peptides displayed on the N-terminus of the major coat protein of bacteriophage M13. The phage particle in this system is formed as a mixture of wild type and modified coat proteins. The N-terminal segment of the modified coat protein was mutated for chemical cleavage, in order to obtain the displayed peptide from the major coat protein. Using 13C, 15N- labeled medium, we introduced stable isotopes, 13C and/or 15N, into the coat proteins. The NMR spectra for the cleaved peptides from the phage particles could be recorded within a few days after the selection of the phage clone.

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Year:  2006        PMID: 16505961     DOI: 10.1007/s10858-005-5054-0

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  25 in total

1.  Convergent solutions to binding at a protein-protein interface.

Authors:  W L DeLano; M H Ultsch; A M de Vos; J A Wells
Journal:  Science       Date:  2000-02-18       Impact factor: 47.728

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Authors:  H B Lowman; S H Bass; N Simpson; J A Wells
Journal:  Biochemistry       Date:  1991-11-12       Impact factor: 3.162

3.  Multiple display of foreign peptides on a filamentous bacteriophage. Peptides from Plasmodium falciparum circumsporozoite protein as antigens.

Authors:  J Greenwood; A E Willis; R N Perham
Journal:  J Mol Biol       Date:  1991-08-20       Impact factor: 5.469

4.  Improved sensitivity of HSQC spectra of exchanging protons at short interscan delays using a new fast HSQC (FHSQC) detection scheme that avoids water saturation.

Authors:  S Mori; C Abeygunawardana; M O Johnson; P C van Zijl
Journal:  J Magn Reson B       Date:  1995-07

Review 5.  Multidimensional heteronuclear nuclear magnetic resonance of proteins.

Authors:  G M Clore; A M Gronenborn
Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

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Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

7.  Humanization and epitope mapping of neutralizing anti-human Fas ligand monoclonal antibodies: structural insights into Fas/Fas ligand interaction.

Authors:  T Nisihara; Y Ushio; H Higuchi; N Kayagaki; N Yamaguchi; K Soejima; S Matsuo; H Maeda; Y Eda; K Okumura; H Yagita
Journal:  J Immunol       Date:  2001-09-15       Impact factor: 5.422

8.  Role of capsid structure and membrane protein processing in determining the size and copy number of peptides displayed on the major coat protein of filamentous bacteriophage.

Authors:  P Malik; T D Terry; L R Gowda; A Langara; S A Petukhov; M F Symmons; L C Welsh; D A Marvin; R N Perham
Journal:  J Mol Biol       Date:  1996-07-05       Impact factor: 5.469

9.  G protein-bound conformation of mastoparan-X: heteronuclear multidimensional transferred nuclear overhauser effect analysis of peptide uniformly enriched with 13C and 15N.

Authors:  H Kusunoki; K Wakamatsu; K Sato; T Miyazawa; T Kohno
Journal:  Biochemistry       Date:  1998-04-07       Impact factor: 3.162

10.  Small peptides as potent mimetics of the protein hormone erythropoietin.

Authors:  N C Wrighton; F X Farrell; R Chang; A K Kashyap; F P Barbone; L S Mulcahy; D L Johnson; R W Barrett; L K Jolliffe; W J Dower
Journal:  Science       Date:  1996-07-26       Impact factor: 47.728

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  4 in total

1.  Precise structural determination of weakly binding peptides by utilizing dihedral angle constraints.

Authors:  Yumiko Mizukoshi; Michiko Nagasu; Ichio Shimada; Hideo Takahashi
Journal:  J Biomol NMR       Date:  2010-03-14       Impact factor: 2.835

2.  Targeting the cryptic sites: NMR-based strategy to improve protein druggability by controlling the conformational equilibrium.

Authors:  Yumiko Mizukoshi; Koh Takeuchi; Yuji Tokunaga; Hitomi Matsuo; Misaki Imai; Miwa Fujisaki; Hajime Kamoshida; Takeshi Takizawa; Hiroyuki Hanzawa; Ichio Shimada
Journal:  Sci Adv       Date:  2020-09-30       Impact factor: 14.136

3.  Structural and interaction analysis of glycoprotein VI-binding peptide selected from a phage display library.

Authors:  Kozue Kato-Takagaki; Yumiko Mizukoshi; Yoshitaka Yoshizawa; Daisuke Akazawa; Yuichi Torii; Katsuki Ono; Ryuji Tanimura; Ichio Shimada; Hideo Takahashi
Journal:  J Biol Chem       Date:  2009-02-19       Impact factor: 5.157

Review 4.  Current NMR Techniques for Structure-Based Drug Discovery.

Authors:  Toshihiko Sugiki; Kyoko Furuita; Toshimichi Fujiwara; Chojiro Kojima
Journal:  Molecules       Date:  2018-01-12       Impact factor: 4.411

  4 in total

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