Literature DB >> 16502120

CA repeat polymorphism of the TNFR2 gene is not associated with bone mineral density in two independent Caucasian populations.

Qing-Yang Huang1, Hui Shen, Hong-Yi Deng, Theresa Conway, Leo Elze, K Michael Davies, Robert R Recker, Hong-Wen Deng.   

Abstract

Osteoporosis has a strong genetic component, but the genes involved are poorly defined. Genome-wide scans in multiple populations have identified chromosome 1p36 as one region linked to bone mineral density (BMD). The tumor necrosis factor receptor 2 (TNFR2) at 1p36 is a positional and functional candidate gene in osteoporosis. In this study, we conducted linkage and association tests between the CA repeat polymorphism of the TNFR2 gene and BMD in two large independent samples using the quantitative transmission disequilibrium test (QTDT) program. The first group of subjects was composed of 1836 individuals from 79 multigeneration pedigrees. The second group was a randomly ascertained set of 636 individuals from 157 nuclear families. We found no evidence of association or linkage for spine or hip BMD in the samples of the multigenerational pedigrees or nuclear families. Through testing for association and for linkage, our data do not support the TNFR2 gene as a QTL underlying hip or spine BMD variation in our Caucasian populations.

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Year:  2006        PMID: 16502120     DOI: 10.1007/s00774-005-0659-7

Source DB:  PubMed          Journal:  J Bone Miner Metab        ISSN: 0914-8779            Impact factor:   2.626


  30 in total

1.  A general test of association for quantitative traits in nuclear families.

Authors:  G R Abecasis; L R Cardon; W O Cookson
Journal:  Am J Hum Genet       Date:  2000-01       Impact factor: 11.025

2.  Characterization of perimenopausal bone loss: a prospective study.

Authors:  R Recker; J Lappe; K Davies; R Heaney
Journal:  J Bone Miner Res       Date:  2000-10       Impact factor: 6.741

3.  Association analysis of bone mineral density and single nucleotide polymorphisms in two candidate genes on chromosome 1p36.

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Journal:  Calcif Tissue Int       Date:  2003-08       Impact factor: 4.333

4.  Genetic determinants of bone mass in adult women: a reevaluation of the twin model and the potential importance of gene interaction on heritability estimates.

Authors:  C W Slemenda; J C Christian; C J Williams; J A Norton; C C Johnston
Journal:  J Bone Miner Res       Date:  1991-06       Impact factor: 6.741

5.  A whole-genome linkage scan suggests several genomic regions potentially containing quantitative trait Loci for osteoporosis.

Authors:  Hong-Wen Deng; Fu-Hua Xu; Qing-Yang Huang; Hui Shen; Hongyi Deng; Theresa Conway; Yong-Jun Liu; Yao-Zhong Liu; Jin-Long Li; Hai-Tao Zhang; K M Davies; Robert R Recker
Journal:  J Clin Endocrinol Metab       Date:  2002-11       Impact factor: 5.958

6.  Variance component linkage analysis indicates a QTL for femoral neck bone mineral density on chromosome 1p36.

Authors:  M Devoto; C Specchia; H H Li; J Caminis; A Tenenhouse; H Rodriguez; L D Spotila
Journal:  Hum Mol Genet       Date:  2001-10-01       Impact factor: 6.150

7.  Physical mapping and genomic structure of the human TNFR2 gene.

Authors:  C P Beltinger; P S White; J M Maris; E P Sulman; S J Jensen; D LePaslier; B J Stallard; D V Goeddel; F J de Sauvage; G M Brodeur
Journal:  Genomics       Date:  1996-07-01       Impact factor: 5.736

8.  Prediction of bone density from vitamin D receptor alleles.

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Journal:  Nature       Date:  1994-01-20       Impact factor: 49.962

9.  First-stage autosomal genome screen in extended pedigrees suggests genes predisposing to low bone mineral density on chromosomes 1p, 2p and 4q.

Authors:  M Devoto; K Shimoya; J Caminis; J Ott; A Tenenhouse; M P Whyte; L Sereda; S Hall; E Considine; C J Williams; G Tromp; H Kuivaniemi; L Ala-Kokko; D J Prockop; L D Spotila
Journal:  Eur J Hum Genet       Date:  1998 Mar-Apr       Impact factor: 4.246

10.  Linkage disequilibrium between polymorphisms in the human TNFRSF1B gene and their association with bone mass in perimenopausal women.

Authors:  Omar M E Albagha; Paul N Tasker; Fiona E A McGuigan; David M Reid; Stuart H Ralston
Journal:  Hum Mol Genet       Date:  2002-09-15       Impact factor: 6.150

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  1 in total

1.  High resolution linkage and linkage disequilibrium analyses of chromosome 1p36 SNPs identify new positional candidate genes for low bone mineral density.

Authors:  H Zhang; K Sol-Church; H Rydbeck; D Stabley; L D Spotila; M Devoto
Journal:  Osteoporos Int       Date:  2008-07-03       Impact factor: 4.507

  1 in total

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