Literature DB >> 16501107

Dengue virus utilizes a novel strategy for translation initiation when cap-dependent translation is inhibited.

Dianna Edgil1, Charlotta Polacek, Eva Harris.   

Abstract

Viruses have developed numerous mechanisms to usurp the host cell translation apparatus. Dengue virus (DEN) and other flaviviruses, such as West Nile and yellow fever viruses, contain a 5' m7GpppN-capped positive-sense RNA genome with a nonpolyadenylated 3' untranslated region (UTR) that has been presumed to undergo translation in a cap-dependent manner. However, the means by which the DEN genome is translated effectively in the presence of capped, polyadenylated cellular mRNAs is unknown. This report demonstrates that DEN replication and translation are not affected under conditions that inhibit cap-dependent translation by targeting the cap-binding protein eukaryotic initiation factor 4E, a key regulator of cellular translation. We further show that under cellular conditions in which translation factors are limiting, DEN can alternate between canonical cap-dependent translation initiation and a noncanonical mechanism that appears not to require a functional m7G cap. This DEN noncanonical translation is not mediated by an internal ribosome entry site but requires the interaction of the DEN 5' and 3' UTRs for activity, suggesting a novel strategy for translation of animal viruses.

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Year:  2006        PMID: 16501107      PMCID: PMC1395423          DOI: 10.1128/JVI.80.6.2976-2986.2006

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  62 in total

1.  Translation efficiency determines differences in cellular infection among dengue virus type 2 strains.

Authors:  Dianna Edgil; Michael S Diamond; Katherine L Holden; Suman M Paranjape; Eva Harris
Journal:  Virology       Date:  2003-12-20       Impact factor: 3.616

2.  Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E.

Authors:  John D Gross; Nathan J Moerke; Tobias von der Haar; Alexey A Lugovskoy; Alan B Sachs; John E G McCarthy; Gerhard Wagner
Journal:  Cell       Date:  2003-12-12       Impact factor: 41.582

3.  The 3' untranslated region of tobacco necrosis virus RNA contains a barley yellow dwarf virus-like cap-independent translation element.

Authors:  Ruizhong Shen; W Allen Miller
Journal:  J Virol       Date:  2004-05       Impact factor: 5.103

4.  Translation of cellular inhibitor of apoptosis protein 1 (c-IAP1) mRNA is IRES mediated and regulated during cell stress.

Authors:  Marc E Van Eden; Marshall P Byrd; Kyle W Sherrill; Richard E Lloyd
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

5.  A novel interaction of Cap-binding protein complexes eukaryotic initiation factor (eIF) 4F and eIF(iso)4F with a region in the 3'-untranslated region of satellite tobacco necrosis virus.

Authors:  Brandy M Gazo; Patricia Murphy; Jennifer R Gatchel; Karen S Browning
Journal:  J Biol Chem       Date:  2004-01-17       Impact factor: 5.157

6.  Cell-dependent role for the poliovirus 3' noncoding region in positive-strand RNA synthesis.

Authors:  David M Brown; Steven E Kauder; Christopher T Cornell; Gwendolyn M Jang; Vincent R Racaniello; Bert L Semler
Journal:  J Virol       Date:  2004-02       Impact factor: 5.103

7.  Conservation of RNA structures enables TNV and BYDV 5' and 3' elements to cooperate synergistically in cap-independent translation.

Authors:  Frank Meulewaeter; Rosalinde van Lipzig; Alexander P Gultyaev; Cornelis W A Pleij; Daniel Van Damme; Marc Cornelissen; Gerben van Eldik
Journal:  Nucleic Acids Res       Date:  2004-03-12       Impact factor: 16.971

8.  The utility of siRNA transcripts produced by RNA polymerase i in down regulating viral gene expression and replication of negative- and positive-strand RNA viruses.

Authors:  Matthew McCown; Michael S Diamond; Andrew Pekosz
Journal:  Virology       Date:  2003-09-01       Impact factor: 3.616

9.  Cap-independent translational enhancement by the 3' untranslated region of red clover necrotic mosaic virus RNA1.

Authors:  Hiroyuki Mizumoto; Masahiro Tatsuta; Masanori Kaido; Kazuyuki Mise; Tetsuro Okuno
Journal:  J Virol       Date:  2003-11       Impact factor: 5.103

Review 10.  5'- and 3'-noncoding regions in flavivirus RNA.

Authors:  Lewis Markoff
Journal:  Adv Virus Res       Date:  2003       Impact factor: 9.937

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  68 in total

1.  Identification of cis-acting elements in the 3'-untranslated region of the dengue virus type 2 RNA that modulate translation and replication.

Authors:  Mark Manzano; Erin D Reichert; Stephanie Polo; Barry Falgout; Wojciech Kasprzak; Bruce A Shapiro; Radhakrishnan Padmanabhan
Journal:  J Biol Chem       Date:  2011-04-22       Impact factor: 5.157

2.  cis-Acting Sequences and Secondary Structures in Untranslated Regions of Duck Tembusu Virus RNA Are Important for Cap-Independent Translation and Viral Proliferation.

Authors:  Tao Wang; Andres Merits; Yuanyuan Wu; Mingshu Wang; Renyong Jia; Dekang Zhu; Mafeng Liu; Xinxin Zhao; Qiao Yang; Ying Wu; Shaqiu Zhang; Yunya Liu; Ling Zhang; Yanling Yu; Leichang Pan; Shun Chen; Anchun Cheng
Journal:  J Virol       Date:  2020-07-30       Impact factor: 5.103

Review 3.  Recent advances in deciphering viral and host determinants of dengue virus replication and pathogenesis.

Authors:  Karen Clyde; Jennifer L Kyle; Eva Harris
Journal:  J Virol       Date:  2006-08-23       Impact factor: 5.103

4.  Interplay of RNA elements in the dengue virus 5' and 3' ends required for viral RNA replication.

Authors:  Peter Friebe; Eva Harris
Journal:  J Virol       Date:  2010-03-31       Impact factor: 5.103

Review 5.  Biochemistry and Molecular Biology of Flaviviruses.

Authors:  Nicholas J Barrows; Rafael K Campos; Kuo-Chieh Liao; K Reddisiva Prasanth; Ruben Soto-Acosta; Shih-Chia Yeh; Geraldine Schott-Lerner; Julien Pompon; October M Sessions; Shelton S Bradrick; Mariano A Garcia-Blanco
Journal:  Chem Rev       Date:  2018-04-13       Impact factor: 60.622

6.  Avian reovirus nonstructural protein p17-induced G(2)/M cell cycle arrest and host cellular protein translation shutoff involve activation of p53-dependent pathways.

Authors:  Julius L C Chulu; Wei R Huang; L Wang; Wen L Shih; Hung J Liu
Journal:  J Virol       Date:  2010-05-19       Impact factor: 5.103

7.  RPLP1 and RPLP2 Are Essential Flavivirus Host Factors That Promote Early Viral Protein Accumulation.

Authors:  Rafael K Campos; Benjamin Wong; Xuping Xie; Yi-Fan Lu; Pei-Yong Shi; Julien Pompon; Mariano A Garcia-Blanco; Shelton S Bradrick
Journal:  J Virol       Date:  2017-01-31       Impact factor: 5.103

8.  The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis.

Authors:  Karen Clyde; Julio Barrera; Eva Harris
Journal:  Virology       Date:  2008-08-03       Impact factor: 3.616

9.  The polypyrimidine tract-binding protein is required for efficient dengue virus propagation and associates with the viral replication machinery.

Authors:  Azlinda Anwar; K M Leong; Mary L Ng; Justin J H Chu; Mariano A Garcia-Blanco
Journal:  J Biol Chem       Date:  2009-04-20       Impact factor: 5.157

Review 10.  RNA conformational changes in the life cycles of RNA viruses, viroids, and virus-associated RNAs.

Authors:  Anne E Simon; Lee Gehrke
Journal:  Biochim Biophys Acta       Date:  2009-06-06
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