Literature DB >> 16500979

Proton NMR detection of porphyrins and cytochrome C in small unilamellar vesicles: role of the dissociation kinetic constant.

Gregory Da Costa1, Soizic Chevance, Elisabeth Le Rumeur, Arnaud Bondon.   

Abstract

The molecular tumbling of small unilamellar vesicles is not fast enough to enable the detection of (1)H NMR signals of molecules associated with phospholipids. We show that relatively fast kinetic exchange of the interacting molecules is able to induce a strong decrease of the residual homonuclear dipolar coupling, allowing the acquisition of sharp signals. At low molecule/lipids molecular ratio, this can be lead to signal broadening due to exchange at intermediate rates on the NMR chemical timescale. However, proton resonances can be easily detected when sufficient lipids are added to prevent the occurrence of any free compounds in solution. This is demonstrated, using lipid signal suppression, in the case of paramagnetic porphyrin derivatives as well as diamagnetic hematoporphyrin. Since several peptides and proteins are expected to be associated with lipids having relatively fast dynamics, this study addresses, as a first example, the interaction of cytochrome c.

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Year:  2006        PMID: 16500979      PMCID: PMC1414580          DOI: 10.1529/biophysj.106.081521

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  Interaction of dicarboxylic metalloporphyrins with liposomes. The effect of pH on membrane binding revisited.

Authors:  Mariusz Kepczyński; Benjamin Ehrenberg
Journal:  Photochem Photobiol       Date:  2002-11       Impact factor: 3.421

Review 2.  Structure determination of membrane proteins by NMR spectroscopy.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

3.  Kinetics of the interactions of a dicarboxylic porphyrin with unilamellar lipidic vesicles: interplay between bilayer thickness and pH in rate control.

Authors:  N Maman; D Brault
Journal:  Biochim Biophys Acta       Date:  1998-11-11

4.  Hemin monomers in micellar sodium lauryl sulfate. A spectral and equilibrium study with cyanide.

Authors:  J Simplicio
Journal:  Biochemistry       Date:  1972-06-20       Impact factor: 3.162

5.  PASE (PAramagnetic signals enhancement): a new method for NMR study of paramagnetic proteins.

Authors:  A Bondon; C Mouro
Journal:  J Magn Reson       Date:  1998-09       Impact factor: 2.229

6.  Dynamics of pH-dependent self-association and membrane binding of a dicarboxylic porphyrin: a study with small unilamellar vesicles.

Authors:  Stéphanie Bonneau; Nathalie Maman; Daniel Brault
Journal:  Biochim Biophys Acta       Date:  2004-02-10

7.  1H NMR structural characterization of the cytochrome c modifications in a micellar environment.

Authors:  S Chevance; E Le Rumeur; J D de Certaines; G Simonneaux; A Bondon
Journal:  Biochemistry       Date:  2003-12-30       Impact factor: 3.162

  7 in total
  4 in total

1.  Biphenyl bicelle disks align perpendicular to magnetic fields on large temperature scales: a study combining synthesis, solid-state NMR, TEM, and SAXS.

Authors:  Cécile Loudet; Sabine Manet; Stéphane Gineste; Reïko Oda; Marie-France Achard; Erick J Dufourc
Journal:  Biophys J       Date:  2007-02-16       Impact factor: 4.033

Review 2.  NMR of molecules interacting with lipids in small unilamellar vesicles.

Authors:  Grégory Da Costa; Liza Mouret; Soizic Chevance; Elisabeth Le Rumeur; Arnaud Bondon
Journal:  Eur Biophys J       Date:  2007-06-13       Impact factor: 1.733

Review 3.  Bicelles: A natural 'molecular goniometer' for structural, dynamical and topological studies of molecules in membranes.

Authors:  Anna Diller; Cécile Loudet; Fabien Aussenac; Gérard Raffard; Sylvie Fournier; Michel Laguerre; Axelle Grélard; Stanley J Opella; Francesca M Marassi; Erick J Dufourc
Journal:  Biochimie       Date:  2009-02-25       Impact factor: 4.079

Review 4.  Probing the Interactions of Porphyrins with Macromolecules Using NMR Spectroscopy Techniques.

Authors:  Ilche Gjuroski; Julien Furrer; Martina Vermathen
Journal:  Molecules       Date:  2021-03-30       Impact factor: 4.411

  4 in total

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