Literature DB >> 16500104

Genome-wide oscillation of transcription in yeast.

Hans Reinke1, David Gatfield.   

Abstract

Yeast cells growing under continuous conditions at high cellular density employ a robust metabolic cycle for energy generation in which a respiratory burst alternates with a non-respiratory, reductive phase. Two related studies have recently shown that global transcriptional co-regulation of genes defines the phases of this metabolic network in time and synchronizes cell division with metabolism. The finding that many fundamental and diverse cellular processes can be coordinated by global mRNA oscillations implies the existence of a more widespread metabolic clock that might also be present in higher eukaryotes.

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Year:  2006        PMID: 16500104     DOI: 10.1016/j.tibs.2006.02.001

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  8 in total

Review 1.  Mitochondrial regulation of cell cycle and proliferation.

Authors:  Valeria Gabriela Antico Arciuch; María Eugenia Elguero; Juan José Poderoso; María Cecilia Carreras
Journal:  Antioxid Redox Signal       Date:  2012-01-13       Impact factor: 8.401

2.  Transcription factor oscillations induce differential gene expressions.

Authors:  Keng Boon Wee; Wee Kheng Yio; Uttam Surana; Keng Hwee Chiam
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

3.  A rapid genome-scale response of the transcriptional oscillator to perturbation reveals a period-doubling path to phenotypic change.

Authors:  Caroline M Li; Robert R Klevecz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-16       Impact factor: 11.205

4.  Cell state switching factors and dynamical patterning modules: complementary mediators of plasticity in development and evolution.

Authors:  Stuart A Newman; Ramray Bhat; Nadejda V Mezentseva
Journal:  J Biosci       Date:  2009-10       Impact factor: 1.826

Review 5.  Systems glycobiology: biochemical reaction networks regulating glycan structure and function.

Authors:  Sriram Neelamegham; Gang Liu
Journal:  Glycobiology       Date:  2011-03-24       Impact factor: 4.313

Review 6.  Transcription-replication encounters, consequences and genomic instability.

Authors:  Anne Helmrich; Monica Ballarino; Evgeny Nudler; Laszlo Tora
Journal:  Nat Struct Mol Biol       Date:  2013-04       Impact factor: 15.369

7.  Biogenesis and dynamics of mitochondria during the cell cycle: significance of 3'UTRs.

Authors:  Marta Martínez-Diez; Gema Santamaría; Alvaro D Ortega; José M Cuezva
Journal:  PLoS One       Date:  2006-12-20       Impact factor: 3.240

8.  mRNA stability and the unfolding of gene expression in the long-period yeast metabolic cycle.

Authors:  Nicola Soranzo; Mattia Zampieri; Lorenzo Farina; Claudio Altafini
Journal:  BMC Syst Biol       Date:  2009-02-06
  8 in total

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