Literature DB >> 16499927

1.6 A crystal structure of the secreted chorismate mutase from Mycobacterium tuberculosis: novel fold topology revealed.

Mats Okvist1, Raja Dey, Severin Sasso, Elin Grahn, Peter Kast, Ute Krengel.   

Abstract

The presence of exported chorismate mutases produced by certain organisms such as Mycobacterium tuberculosis has been shown to correlate with their pathogenicity. As such, these proteins comprise a new group of promising selective drug targets. Here, we report the high-resolution crystal structure of the secreted dimeric chorismate mutase from M. tuberculosis (*MtCM; encoded by Rv1885c), which represents the first 3D-structure of a member of this chorismate mutase family, termed the AroQ(gamma) subclass. Structures are presented both for the unliganded enzyme and for a complex with a transition state analog. The protomer fold resembles the structurally characterized (dimeric) Escherichia coli chorismate mutase domain, but exhibits a new topology, with helix H4 of *MtCM carrying the catalytic site residue missing in the shortened helix H1. Furthermore, the structure of each *MtCM protomer is significantly more compact and only harbors one active site pocket, which is formed entirely by one polypeptide chain. Apart from the structural model, we present evidence as to how the substrate may enter the active site.

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Year:  2006        PMID: 16499927     DOI: 10.1016/j.jmb.2006.01.069

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  Artificial domain duplication replicates evolutionary history of ketol-acid reductoisomerases.

Authors:  Jackson K B Cahn; Sabine Brinkmann-Chen; Andrew R Buller; Frances H Arnold
Journal:  Protein Sci       Date:  2015-12-21       Impact factor: 6.725

Review 2.  Cohesion group approach for evolutionary analysis of TyrA, a protein family with wide-ranging substrate specificities.

Authors:  Carol A Bonner; Terrence Disz; Kaitlyn Hwang; Jian Song; Veronika Vonstein; Ross Overbeek; Roy A Jensen
Journal:  Microbiol Mol Biol Rev       Date:  2008-03       Impact factor: 11.056

3.  Molecular dynamics simulation of the last step of a catalytic cycle: product release from the active site of the enzyme chorismate mutase from Mycobacterium tuberculosis.

Authors:  Alexandra Choutko; Wilfred F van Gunsteren
Journal:  Protein Sci       Date:  2012-11       Impact factor: 6.725

4.  A novel noncovalent complex of chorismate mutase and DAHP synthase from Mycobacterium tuberculosis: protein purification, crystallization and X-ray diffraction analysis.

Authors:  Mats Okvist; Severin Sasso; Kathrin Roderer; Peter Kast; Ute Krengel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-09-25

5.  Definition and testing of the GROMOS force-field versions 54A7 and 54B7.

Authors:  Nathan Schmid; Andreas P Eichenberger; Alexandra Choutko; Sereina Riniker; Moritz Winger; Alan E Mark; Wilfred F van Gunsteren
Journal:  Eur Biophys J       Date:  2011-04-30       Impact factor: 1.733

6.  Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis.

Authors:  Daniel Burschowsky; André van Eerde; Mats Ökvist; Alexander Kienhöfer; Peter Kast; Donald Hilvert; Ute Krengel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-24       Impact factor: 11.205

7.  Solvating atomic level fine-grained proteins in supra-molecular level coarse-grained water for molecular dynamics simulations.

Authors:  Sereina Riniker; Andreas P Eichenberger; Wilfred F van Gunsteren
Journal:  Eur Biophys J       Date:  2012-07-14       Impact factor: 1.733

8.  Evolving the naturally compromised chorismate mutase from Mycobacterium tuberculosis to top performance.

Authors:  Jūratė Fahrig-Kamarauskaitė; Kathrin Würth-Roderer; Helen V Thorbjørnsrud; Susanne Mailand; Ute Krengel; Peter Kast
Journal:  J Biol Chem       Date:  2020-10-09       Impact factor: 5.157

9.  Biochemical and structural characterization of the secreted chorismate mutase (Rv1885c) from Mycobacterium tuberculosis H37Rv: an *AroQ enzyme not regulated by the aromatic amino acids.

Authors:  Sook-Kyung Kim; Sathyavelu K Reddy; Bryant C Nelson; Gregory B Vasquez; Andrew Davis; Andrew J Howard; Sean Patterson; Gary L Gilliland; Jane E Ladner; Prasad T Reddy
Journal:  J Bacteriol       Date:  2006-12       Impact factor: 3.490

10.  The two chorismate mutases from both Mycobacterium tuberculosis and Mycobacterium smegmatis: biochemical analysis and limited regulation of promoter activity by aromatic amino acids.

Authors:  Cristopher Z Schneider; Tanya Parish; Luiz A Basso; Diógenes S Santos
Journal:  J Bacteriol       Date:  2007-10-26       Impact factor: 3.490

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