Literature DB >> 16497671

Dodecaprenyl phosphate-galacturonic acid as a donor substrate for lipopolysaccharide core glycosylation in Rhizobium leguminosarum.

Suparna Kanjilal-Kolar1, Christian R H Raetz.   

Abstract

The lipid A and inner core regions of Rhizobium leguminosarum lipopolysaccharide contain four galacturonic acid (GalA) residues. Two are attached to the outer unit of the 3-deoxy-D-manno-octulosonic acid (Kdo) disaccharide, one to the mannose residue, and one to the 4'-position of lipid A. The enzymes RgtA and RgtB, described in the accompanying article, catalyze GalA transfer to the Kdo residue, whereas RgtC is responsible for modification of the core mannose unit. Heterologous expression of RgtA in Sinorhizhobium meliloti 1021, a strain that normally lacks GalA modifications on its Kdo disaccharide, resulted in detectable GalA transferase activity in isolated membrane preparations, suggesting that the appropriate GalA donor substrate is available in S. meliloti membranes. In contrast, heterologous expression of RgtA in Escherichia coli yielded inactive membranes. However, RgtA activity was detectable in the E. coli system when total lipids from R. leguminosarum 3841 or S. meliloti 1021 were added. We have now purified and characterized dodecaprenyl (C60) phosphate-GalA as a minor novel lipid of R. leguminosarum 3841 and S. meliloti. This substance is stable to mild base hydrolysis and was purified by DEAE-cellulose column chromatography. Its structure was established by a combination of electrospray ionization mass spectrometry and gas-liquid chromatography. Purified dodecaprenyl phosphate-GalA supports the efficient transfer of GalA to Kdo2-1-dephospho-lipid IV(A) by membranes of E. coli cells expressing RgtA, RgtB, and RgtC. The identification of a polyisoprene phosphate-GalA donor substrate suggests that the active site of RgtA faces the periplasmic side of the inner membrane. This work represents the first definitive characterization of a lipid-linked GalA derivative with the proposed structure dodecaprenyl phosphate-beta-D-GalA.

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Year:  2006        PMID: 16497671      PMCID: PMC2556281          DOI: 10.1074/jbc.M513865200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  54 in total

Review 1.  Lipopolysaccharide endotoxins.

Authors:  Christian R H Raetz; Chris Whitfield
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

Review 2.  Substrate analogues to study cell-wall biosynthesis and its inhibition.

Authors:  Kristi Lazar; Suzanne Walker
Journal:  Curr Opin Chem Biol       Date:  2002-12       Impact factor: 8.822

3.  Large-scale isolation of dolichol-linked oligosaccharides with homogeneous oligosaccharide structures: determination of steady-state dolichol-linked oligosaccharide compositions.

Authors:  D J Kelleher; D Karaoglu; R Gilmore
Journal:  Glycobiology       Date:  2001-04       Impact factor: 4.313

4.  Expression cloning of three Rhizobium leguminosarum lipopolysaccharide core galacturonosyltransferases.

Authors:  Suparna Kanjilal-Kolar; Shib Sankar Basu; Margaret I Kanipes; Ziqiang Guan; Teresa A Garrett; Christian R H Raetz
Journal:  J Biol Chem       Date:  2006-02-23       Impact factor: 5.157

5.  Core oligosaccharides of Plesiomonas shigelloides O54:H2 (strain CNCTC 113/92): structural and serological analysis of the lipopolysaccharide core region, the O-antigen biological repeating unit, and the linkage between them.

Authors:  Tomasz Niedziela; Jolanta Lukasiewicz; Wojciech Jachymek; Monika Dzieciatkowska; Czeslaw Lugowski; Lennart Kenne
Journal:  J Biol Chem       Date:  2002-01-16       Impact factor: 5.157

6.  A Sinorhizobium meliloti lipopolysaccharide mutant altered in cell surface sulfation.

Authors:  David H Keating; Michael G Willits; Sharon R Long
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

7.  Accumulation of a polyisoprene-linked amino sugar in polymyxin-resistant Salmonella typhimurium and Escherichia coli: structural characterization and transfer to lipid A in the periplasm.

Authors:  M S Trent; A A Ribeiro; W T Doerrler; S Lin; R J Cotter; C R Raetz
Journal:  J Biol Chem       Date:  2001-09-04       Impact factor: 5.157

8.  Expression cloning and characterization of the C28 acyltransferase of lipid A biosynthesis in Rhizobium leguminosarum.

Authors:  Shib Sankar Basu; Mark J Karbarz; Christian R H Raetz
Journal:  J Biol Chem       Date:  2002-05-17       Impact factor: 5.157

9.  Expression cloning and biochemical characterization of a Rhizobium leguminosarum lipid A 1-phosphatase.

Authors:  Mark J Karbarz; Suzanne R Kalb; Robert J Cotter; Christian R H Raetz
Journal:  J Biol Chem       Date:  2003-07-16       Impact factor: 5.157

10.  ATPase activity of the MsbA lipid flippase of Escherichia coli.

Authors:  William T Doerrler; Christian R H Raetz
Journal:  J Biol Chem       Date:  2002-07-15       Impact factor: 5.157

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  15 in total

1.  Expression cloning of three Rhizobium leguminosarum lipopolysaccharide core galacturonosyltransferases.

Authors:  Suparna Kanjilal-Kolar; Shib Sankar Basu; Margaret I Kanipes; Ziqiang Guan; Teresa A Garrett; Christian R H Raetz
Journal:  J Biol Chem       Date:  2006-02-23       Impact factor: 5.157

2.  Characterization of galacturonosyl transferase genes rgtA, rgtB, rgtC, rgtD, and rgtE responsible for lipopolysaccharide synthesis in nitrogen-fixing endosymbiont Rhizobium leguminosarum: lipopolysaccharide core and lipid galacturonosyl residues confer membrane stability.

Authors:  Dusty B Brown; L Scott Forsberg; Elmar L Kannenberg; Russell W Carlson
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

3.  Structures of the lipopolysaccharides from Rhizobium leguminosarum RBL5523 and its UDP-glucose dehydrogenase mutant (exo5).

Authors:  Artur Muszynski; Marc Laus; Jan W Kijne; Russell W Carlson
Journal:  Glycobiology       Date:  2010-09-02       Impact factor: 4.313

4.  The calcium-stimulated lipid A 3-O deacylase from Rhizobium etli is not essential for plant nodulation.

Authors:  Christian Sohlenkamp; Christian R H Raetz; Brian O Ingram
Journal:  Biochim Biophys Acta       Date:  2013-04-12

5.  Purification and characterization of the lipid A 1-phosphatase LpxE of Rhizobium leguminosarum.

Authors:  Mark J Karbarz; David A Six; Christian R H Raetz
Journal:  J Biol Chem       Date:  2008-11-04       Impact factor: 5.157

6.  Elucidation of a novel lipid A α-(1,1)-GalA transferase gene (rgtF) from Mesorhizobium loti: Heterologous expression of rgtF causes Rhizobium etli to synthesize lipid A with α-(1,1)-GalA.

Authors:  Dusty B Brown; Artur Muszynski; Russell W Carlson
Journal:  Glycobiology       Date:  2013-01-02       Impact factor: 4.313

7.  An undecaprenyl phosphate-aminoarabinose flippase required for polymyxin resistance in Escherichia coli.

Authors:  Aixin Yan; Ziqiang Guan; Christian R H Raetz
Journal:  J Biol Chem       Date:  2007-10-10       Impact factor: 5.157

8.  Crystal structure and acyl chain selectivity of Escherichia coli LpxD, the N-acyltransferase of lipid A biosynthesis.

Authors:  Craig M Bartling; Christian R H Raetz
Journal:  Biochemistry       Date:  2009-09-15       Impact factor: 3.162

Review 9.  Lipid A modification systems in gram-negative bacteria.

Authors:  Christian R H Raetz; C Michael Reynolds; M Stephen Trent; Russell E Bishop
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

10.  Kdo hydroxylase is an inner core assembly enzyme in the Ko-containing lipopolysaccharide biosynthesis.

Authors:  Hak Suk Chung; Eun Gyeong Yang; Dohyeon Hwang; Ji Eun Lee; Ziqiang Guan; Christian R H Raetz
Journal:  Biochem Biophys Res Commun       Date:  2014-09-06       Impact factor: 3.575

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