| Literature DB >> 16495928 |
A Lièvre1, H Blons, A M Houllier, O Laccourreye, D Brasnu, P Beaune, P Laurent-Puig.
Abstract
Mitochondrial DNA mutations have been reported in several types of tumours, including head and neck squamous cell carcinoma (HNSCC). The noncoding region of the Displacement-Loop (D-Loop) has emerged as a mutational hotspot and we recently found that they were associated with prognosis and response to 5 fluorouracil (5FU) in colon cancers. In order to evaluate the frequence of D-Loop mutations in a large series of HNSCC and establish correlations with clinicopathologic parameters, we sequenced the D-Loop of 109 HNSCC before a treatment by neoadjuvant 5FU-cisplatin-based chemotherapy and surgery. Then, we correlated these mutations with prognosis and response to chemotherapy. A D-Loop mutation was identified in 21% of the tumors, the majority of them were located in a C-tract (D310). The prevalence of D310 mutations increased significantly with the number of cytosines in the matched normal tissue sequence (P=0.02). Hypopharyngeal cancer was significantly more frequent (P=0.03) and tobacco consumption more important (P=0.01) in the group of patients with D-Loop mutation. The presence of D-Loop mutation was not associated with prognosis or with response to neoadjuvant chemotherapy. These results suggest that D-Loop mutations should be considered as a cancer biomarker that may be useful for the early detection of HNSCC in individuals at risk of this cancer.Entities:
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Year: 2006 PMID: 16495928 PMCID: PMC2361200 DOI: 10.1038/sj.bjc.6602993
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Clinicopathologic characteristics of HNSCC patients according to D-Loop mutation
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| Age (mean) | 56.9±2 | 58.0±1 | 0.655 | |
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| Male | 98 (89.9) | 22 (95.6) | 76 (88.4) | 0.3 |
| Female | 11 (10.1) | 1 (4.4) | 10 (11.6) | |
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| Oral cavity | 13 (11.9) | 1 (4.4) | 12 (13.9) | 0.03 |
| Oropharynx | 46 (42.2) | 7 (30.4) | 39 (45.4) | |
| Hypopharynx | 27 (24.8) | 11 (47.8) | 16 (18.6) | |
| Endolarynx | 23 (21.1) | 4 (17.4) | 19 (22.1) | |
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| I | 3 (2.8) | 2 (8.7) | 1 (1.2) | 0.24 |
| II | 23 (21.1) | 4 (17.4) | 19 (22.1) | |
| III | 25 (22.9) | 6 (26.1) | 19 (22.1) | |
| IV | 58 (53.2) | 11 (47.8) | 47 (54.6) | |
| Tobacco (mean pack-year) | 48±3 | 37±2 | 0.01 | |
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| Yes | 72 (67.3) | 19 (82.6) | 53 (63.1) | 0.07 |
| No | 35 (32.7) | 4 (17.4) | 31 (36.9) | |
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| Responder | 72 (66.1) | 14 (60.9) | 58 (67.4) | 0.55 |
| Nonresponder | 37 (33.9) | 9 (39.1) | 28 (32.6) | |
| Total | 109 (100) | 23 | 86 | |
HNSCC=head and neck squamous cell carcinoma; D-Loop=Displacement-Loop.
Summary of D-Loop somatic mutations found in the 109 HNSCC patients
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| 16 | 303–309 | C7 → C7/C9 | Heteroplasmy |
| 22 | 214 | A → G | Homoplasmy |
| 303–309 | C8/C9 → C8 | Homoplasmy | |
| 23 | 514 | (CA)5 → (CA)4 | Homoplasmy |
| 28 | 314 | C → T | Homoplasmy |
| 32 | 303–309 | C8 → C7 | Homoplasmy |
| 42 | 303–309 | C7 → C7/C9 | Heteroplasmy |
| 43 | 303–309 | C8/C9 → C8/C10 | Heteroplasmy |
| 48 | 303–309 | C8 → C7/C8 | Heteroplasmy |
| 53 | 303–309 | C8 → C8/C9 | Heteroplasmy |
| 63 | 303–309 | C8/C9 → C8 | Homoplasmy |
| 82 | 303–309 | C9/C10 → C9 | Homoplasmy |
| 110 | 303–309 | C7 → C6/C7 | Heteroplasmy |
| 114 | 303–309 | C8/C9 → C9/C10 | Heteroplasmy |
| 118 | 213 | A → G | Homoplasmy |
| 127 | 303–309 | C8 → C8/C9 | Heteroplasmy |
| 141 | 303–309 | C9 → C8 | Homoplasmy |
| 146 | 408 | T → A | Heteroplasmy |
| 153 | 239 | C → T | Homoplasmy |
| 303–309 | C7 → C9/C10 | Heteroplasmy | |
| 155 | 303–309 | C8/C9 → C9 | Heteroplasmy |
| 161 | 303–309 | C8 → C7/C8 | Heteroplasmy |
| 167 | 303–309 | C8/C9 → complex | Heteroplasmy |
| 180 | 303–309 | C9 → C8/C9 | Heteroplasmy |
| 206 | 303–309 | C8 → C8/C9 | Heteroplasmy |
N=normal tissue; T=tumour tissue.
HNSCC=head and neck squamous cell carcinoma; D-Loop=Displacement-Loop.
Summary of the germline polymorphisms found in the 109 head and neck squamous cell carcinoma patients
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| 16, 53 | G → A | 200 | Yes |
| 20, 48, 206 | T → C | 204 | Yes |
| 48, 206 | G → A | 207 | Yes |
| 27, 32, 52, 128, 150 | G → A | 228 | Yes |
| 82 | T → C | 239 | Yes |
| 199 | A → G | 240 | Novel |
| 41, 54, 171 | C → T | 242 | Yes |
| 133 | A → G | 249 | Novel |
| 48 | T → C | 250 | Yes |
| 44 | A → G | 257 | Yes |
| 171 | C → T | 295 | Yes |
| 9, 13, 18, 26, 31, 35, 65, 72, 76, 84, 87, 88, 116, 164, 169, 177, 183, 190 | C7 → C8 | 303–309 | Yes |
| 20, 133, 156, 159 | C7 → C9 | 303–309 | Yes |
| 22 | C → T | 456 | Yes |
| 28, 32, 41, 52, 54, 128, 171 | C → T | 462 | Yes |
| 44, 119 | T → C | 477 | Yes |
| 28, 32, 41, 52, 54, 128, 171, 172 | T → C | 489 | Yes |
| 26, 83, 194, 208 | C → T | 497 | Yes |
| 47 | A → C | 512 | Yes |
| 23, 32, 71, 72, 83, 130, 146, 172, 195 | (CA)5 → (CA)4 | 514 | Yes |
| 192 | (CA)5 → (CA)6 | 514 | Yes |
| 9, 22 | (CA)5 → (CA)7 | 514 | Yes |
| 65 | A → G | 533 | Yes |
| 165 | C → T | 534 | Novel |
MITOMAP database available on web: www.mitomap.org.
Figure 1Overall survival curves of HNSCC patients with and without tumour D-Loop mutation.