Literature DB >> 16494505

CvP-bias as an index to predict the life style of last common ancestor.

Bin-Guang Ma1, Qin-Song Song, Hong-Yu Zhang.   

Abstract

CvP-bias (difference between proportions of charged and polar non-charged amino acids) has been recognized as an efficient criterion to distinguish hyperthermophiles from mesothermophiles. By analyzing the CvP-biases of seven barophiles's proteomes, we reveal that this criterion still works for barophiles. As a result, CvP-bias criterion is applicable to disclosing some secrets in the lifestyles of the last common ancestor (LCA), no matter the LCA lived in deep sea or not, which is helpful to building a self-consistent model for the LCA.

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Year:  2006        PMID: 16494505     DOI: 10.1080/07391102.2006.10507080

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  1 in total

1.  Deep transcriptome-sequencing and proteome analysis of the hydrothermal vent annelid Alvinella pompejana identifies the CvP-bias as a robust measure of eukaryotic thermostability.

Authors:  Thomas Holder; Claire Basquin; Judith Ebert; Nadine Randel; Didier Jollivet; Elena Conti; Gáspár Jékely; Fulvia Bono
Journal:  Biol Direct       Date:  2013-01-16       Impact factor: 4.540

  1 in total

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