Literature DB >> 1649389

Xeroderma pigmentosum complementation group C cells remove pyrimidine dimers selectively from the transcribed strand of active genes.

J Venema1, A van Hoffen, V Karcagi, A T Natarajan, A A van Zeeland, L H Mullenders.   

Abstract

We have measured the removal of UV-induced pyrimidine dimers from DNA fragments of the adenosine deaminase (ADA) and dihydrofolate reductase (DHFR) genes in primary normal human and xeroderma pigmentosum complementation group C (XP-C) cells. Using strand-specific probes, we show that in normal cells, preferential repair of the 5' part of the ADA gene is due to the rapid and efficient repair of the transcribed strand. Within 8 h after irradiation with UV at 10 J m-2, 70% of the pyrimidine dimers in this strand are removed. The nontranscribed strand is repaired at a much slower rate, with 30% dimers removed after 8 h. Repair of the transcribed strand in XP-C cells occurs at a rate indistinguishable from that in normal cells, but the nontranscribed strand is not repaired significantly in these cells. Similar results were obtained for the DHFR gene. In the 3' part of the ADA gene, however, both normal and XP-C cells perform fast and efficient repair of either strand, which is likely to be caused by the presence of transcription units on both strands. The factor defective in XP-C cells is apparently involved in the processing of DNA damage in inactive parts of the genome, including nontranscribed strands of active genes. These findings have important implications for the understanding of the mechanism of UV-induced excision repair and mutagenesis in mammalian cells.

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Year:  1991        PMID: 1649389      PMCID: PMC361228          DOI: 10.1128/mcb.11.8.4128-4134.1991

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  41 in total

Review 1.  How RNA polymerase II terminates transcription in higher eukaryotes.

Authors:  N J Proudfoot
Journal:  Trends Biochem Sci       Date:  1989-03       Impact factor: 13.807

2.  DNA repair in the metallothionein gene increases with transcriptional activation.

Authors:  D S Okumoto; V A Bohr
Journal:  Nucleic Acids Res       Date:  1987-12-10       Impact factor: 16.971

3.  The limits of the DNase I-sensitive domain of the human apolipoprotein B gene coincide with the locations of chromosomal anchorage loops and define the 5' and 3' boundaries of the gene.

Authors:  B Levy-Wilson; C Fortier
Journal:  J Biol Chem       Date:  1989-12-15       Impact factor: 5.157

4.  Complete sequence and structure of the gene for human adenosine deaminase.

Authors:  D A Wiginton; D J Kaplan; J C States; A L Akeson; C M Perme; I J Bilyk; A J Vaughn; D L Lattier; J J Hutton
Journal:  Biochemistry       Date:  1986-12-16       Impact factor: 3.162

5.  Cell type-specific transcriptional regulation of the human adenosine deaminase gene.

Authors:  D L Lattier; J C States; J J Hutton; D A Wiginton
Journal:  Nucleic Acids Res       Date:  1989-02-11       Impact factor: 16.971

Review 6.  Transcription termination and the regulation of gene expression.

Authors:  T Platt
Journal:  Annu Rev Biochem       Date:  1986       Impact factor: 23.643

7.  Resistance of plateau-phase human normal and xeroderma pigmentosum fibroblasts to the cytotoxic effect of ultraviolet light.

Authors:  G L Chan; J B Little
Journal:  Mutat Res       Date:  1979-12       Impact factor: 2.433

8.  Characterization of a DNA repair domain containing the dihydrofolate reductase gene in Chinese hamster ovary cells.

Authors:  V A Bohr; D S Okumoto; L Ho; P C Hanawalt
Journal:  J Biol Chem       Date:  1986-12-15       Impact factor: 5.157

9.  Demethylation enhances removal of pyrimidine dimers from the overall genome and from specific DNA sequences in Chinese hamster ovary cells.

Authors:  L Ho; V A Bohr; P C Hanawalt
Journal:  Mol Cell Biol       Date:  1989-04       Impact factor: 4.272

10.  The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain.

Authors:  P V Loc; W H Strätling
Journal:  EMBO J       Date:  1988-03       Impact factor: 11.598

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  81 in total

1.  A multistep damage recognition mechanism for global genomic nucleotide excision repair.

Authors:  K Sugasawa; T Okamoto; Y Shimizu; C Masutani; S Iwai; F Hanaoka
Journal:  Genes Dev       Date:  2001-03-01       Impact factor: 11.361

2.  Xeroderma pigmentosum p48 gene enhances global genomic repair and suppresses UV-induced mutagenesis.

Authors:  J Y Tang; B J Hwang; J M Ford; P C Hanawalt; G Chu
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

3.  DNA damage in the nucleosome core is refractory to repair by human excision nuclease.

Authors:  R Hara; J Mo; A Sancar
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

4.  Double-check probing of DNA bending and unwinding by XPA-RPA: an architectural function in DNA repair.

Authors:  M Missura; T Buterin; R Hindges; U Hübscher; J Kaspárková; V Brabec; H Naegeli
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

5.  Clusters of transcription-coupled repair in the human genome.

Authors:  Jordi Surrallés; María J Ramírez; Ricard Marcos; Adayapalam T Natarajan; Leon H F Mullenders
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-25       Impact factor: 11.205

Review 6.  Evolutionary consequences of nonrandom damage and repair of chromatin domains.

Authors:  T Boulikas
Journal:  J Mol Evol       Date:  1992-08       Impact factor: 2.395

7.  Nucleotide excision repair by mutant xeroderma pigmentosum group A (XPA) proteins with deficiency in interaction with RPA.

Authors:  Masafumi Saijo; Arato Takedachi; Kiyoji Tanaka
Journal:  J Biol Chem       Date:  2010-12-09       Impact factor: 5.157

8.  Definition of a short region of XPG necessary for TFIIH interaction and stable recruitment to sites of UV damage.

Authors:  Fabrizio Thorel; Angelos Constantinou; Isabelle Dunand-Sauthier; Thierry Nouspikel; Philippe Lalle; Anja Raams; Nicolaas G J Jaspers; Wim Vermeulen; Mahmud K K Shivji; Richard D Wood; Stuart G Clarkson
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

9.  Assessment of DNA damage and repair in specific genomic regions by quantitative immuno-coupled PCR.

Authors:  M F Denissenko; S Venkatachalam; E F Yamasaki; A A Wani
Journal:  Nucleic Acids Res       Date:  1994-06-25       Impact factor: 16.971

10.  p53 and DNA damage-inducible expression of the xeroderma pigmentosum group C gene.

Authors:  Shanthi Adimoolam; James M Ford
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-19       Impact factor: 11.205

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