Literature DB >> 16492780

Structure and mechanism of mouse cysteine dioxygenase.

Jason G McCoy1, Lucas J Bailey, Eduard Bitto, Craig A Bingman, David J Aceti, Brian G Fox, George N Phillips.   

Abstract

Cysteine dioxygenase (CDO) catalyzes the oxidation of l-cysteine to cysteine sulfinic acid. Deficiencies in this enzyme have been linked to autoimmune diseases and neurological disorders. The x-ray crystal structure of CDO from Mus musculus was solved to a nominal resolution of 1.75 Angstroms. The sequence is 91% identical to that of a human homolog. The structure reveals that CDO adopts the typical beta-barrel fold of the cupin superfamily. The NE2 atoms of His-86, -88, and -140 provide the metal binding site. The structure further revealed a covalent linkage between the side chains of Cys-93 and Tyr-157, the cysteine of which is conserved only in eukaryotic proteins. Metal analysis showed that the recombinant enzyme contained a mixture of iron, nickel, and zinc, with increased iron content associated with increased catalytic activity. Details of the predicted active site are used to present and discuss a plausible mechanism of action for the enzyme.

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Year:  2006        PMID: 16492780      PMCID: PMC1413891          DOI: 10.1073/pnas.0509262103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

1.  Crystal structure of human homogentisate dioxygenase.

Authors:  G P Titus; H A Mueller; J Burgner; S Rodríguez De Córdoba; M A Peñalva; D E Timm
Journal:  Nat Struct Biol       Date:  2000-07

2.  Dioxygen Activation by Enzymes with Mononuclear Non-Heme Iron Active Sites.

Authors:  Lawrence Que; Raymond Y. N. Ho
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.

Authors:  J Gough; K Karplus; R Hughey; C Chothia
Journal:  J Mol Biol       Date:  2001-11-02       Impact factor: 5.469

4.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

5.  Anaerobic enzyme.substrate structures provide insight into the reaction mechanism of the copper-dependent quercetin 2,3-dioxygenase.

Authors:  Roberto A Steiner; Kor H Kalk; Bauke W Dijkstra
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

6.  Modeling and experiment yields the structure of acireductone dioxygenase from Klebsiella pneumoniae.

Authors:  Thomas C Pochapsky; Susan Sondej Pochapsky; Tingting Ju; Huaping Mo; Faizah Al-Mjeni; Michael J Maroney
Journal:  Nat Struct Biol       Date:  2002-12

7.  The metal-catalyzed oxidation of methionine in peptides by Fenton systems involves two consecutive one-electron oxidation processes.

Authors:  J Hong; C Schöneich
Journal:  Free Radic Biol Med       Date:  2001-12-01       Impact factor: 7.376

8.  Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities.

Authors:  E J Woo; J M Dunwell; P W Goodenough; A C Marvier; R W Pickersgill
Journal:  Nat Struct Biol       Date:  2000-11

9.  Pentacoordinate (&mgr;-Oxo)diiron(III) Thiolate Complexes and Dimeric Iron(II) Precursors.

Authors:  Ghezai Musie; Chia-Huei Lai; Joseph H. Reibenspies; Lloyd W. Sumner; Marcetta Y. Darensbourg
Journal:  Inorg Chem       Date:  1998-08-10       Impact factor: 5.165

10.  Crystal structure of the copper-containing quercetin 2,3-dioxygenase from Aspergillus japonicus.

Authors:  Fabrizia Fusetti; Klaus H Schröter; Roberto A Steiner; Paula I van Noort; Tjaard Pijning; Henriëtte J Rozeboom; Kor H Kalk; Maarten R Egmond; Bauke W Dijkstra
Journal:  Structure       Date:  2002-02       Impact factor: 5.006

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  69 in total

1.  Sulfur versus iron oxidation in an iron-thiolate model complex.

Authors:  Aidan R McDonald; Michael R Bukowski; Erik R Farquhar; Timothy A Jackson; Kevin D Koehntop; Mi Sook Seo; Raymond F De Hont; Audria Stubna; Jason A Halfen; Eckard Münck; Wonwoo Nam; Lawrence Que
Journal:  J Am Chem Soc       Date:  2010-11-11       Impact factor: 15.419

2.  Synthesis and ligand non-innocence of thiolate-ligated (N4S) Iron(II) and nickel(II) bis(imino)pyridine complexes.

Authors:  Leland R Widger; Yunbo Jiang; Maxime A Siegler; Devesh Kumar; Reza Latifi; Sam P de Visser; Guy N L Jameson; David P Goldberg
Journal:  Inorg Chem       Date:  2013-08-30       Impact factor: 5.165

3.  Identification and characterization of bacterial cysteine dioxygenases: a new route of cysteine degradation for eubacteria.

Authors:  John E Dominy; Chad R Simmons; P Andrew Karplus; Amy M Gehring; Martha H Stipanuk
Journal:  J Bacteriol       Date:  2006-08       Impact factor: 3.490

4.  Cofactor Biogenesis in Cysteamine Dioxygenase: C-F Bond Cleavage with Genetically Incorporated Unnatural Tyrosine.

Authors:  Yifan Wang; Wendell P Griffith; Jiasong Li; Teruaki Koto; Daniel J Wherritt; Elizabeth Fritz; Aimin Liu
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-05       Impact factor: 15.336

Review 5.  Understanding human thiol dioxygenase enzymes: structure to function, and biology to pathology.

Authors:  Bibekananda Sarkar; Mahesh Kulharia; Anil K Mantha
Journal:  Int J Exp Pathol       Date:  2017-04-24       Impact factor: 1.925

6.  Use of a Tyrosine Analogue To Modulate the Two Activities of a Nonheme Iron Enzyme OvoA in Ovothiol Biosynthesis, Cysteine Oxidation versus Oxidative C-S Bond Formation.

Authors:  Li Chen; Nathchar Naowarojna; Heng Song; Shu Wang; Jiangyun Wang; Zixin Deng; Changming Zhao; Pinghua Liu
Journal:  J Am Chem Soc       Date:  2018-03-21       Impact factor: 15.419

Review 7.  Activation of Dioxygen by Iron and Manganese Complexes: A Heme and Nonheme Perspective.

Authors:  Sumit Sahu; David P Goldberg
Journal:  J Am Chem Soc       Date:  2016-08-30       Impact factor: 15.419

8.  Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.

Authors:  Mark D White; Laura Dalle Carbonare; Mikel Lavilla Puerta; Sergio Iacopino; Martin Edwards; Kate Dunne; Elisabete Pires; Colin Levy; Michael A McDonough; Francesco Licausi; Emily Flashman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

9.  Spectroscopic Evidence for the Two C-H-Cleaving Intermediates of Aspergillus nidulans Isopenicillin N Synthase.

Authors:  Esta Tamanaha; Bo Zhang; Yisong Guo; Wei-Chen Chang; Eric W Barr; Gang Xing; Jennifer St Clair; Shengfa Ye; Frank Neese; J Martin Bollinger; Carsten Krebs
Journal:  J Am Chem Soc       Date:  2016-07-05       Impact factor: 15.419

10.  Influence of cysteine 164 on active site structure in rat cysteine dioxygenase.

Authors:  Matthias Fellner; Eleni Siakkou; Abayomi S Faponle; Egor P Tchesnokov; Sam P de Visser; Sigurd M Wilbanks; Guy N L Jameson
Journal:  J Biol Inorg Chem       Date:  2016-05-18       Impact factor: 3.358

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