Literature DB >> 16491499

Chemical-reaction-based site-selective DNA cutter for PCR-free gene manipulation.

Yoji Yamamoto1, Akihiko Uehara, Akira Watanabe, Hiroyuki Aburatani, Makoto Komiyama.   

Abstract

An artificial restriction DNA cutter (ARCUT), recently developed by the authors, was used to construct a fusion protein. The gene of WW-domain-containing oxidoreductase (WWOX) was cut by ARCUT just before its stop codon, and ligated to fuse the gene of enhanced green fluorescent protein (EGFP). The reading frames of two genes were adjusted to coincide each other. Throughout the manipulation, no PCR was employed. The fluorescent fusion protein was successfully expressed in mammalian cells, and showed entirely different subcellular localization from EGFP itself. Apparently, the DNA was kept completely intact during the manipulation. The man-made tool ARCUT has promising features for future biotechnology and molecular biology.

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Year:  2006        PMID: 16491499     DOI: 10.1002/cbic.200500402

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  7 in total

1.  Enzymatic Synthesis of Chemical Nuclease Triplex-Forming Oligonucleotides with Gene-Silencing Applications.

Authors:  Bríonna McGorman; Nicolò Zuin Fantoni; Sinéad O'Carroll; Anna Ziemele; Afaf H El-Sagheer; Tom Brown; Andrew Kellett
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

2.  Crystal structure of Ce(IV)/dipicolinate complex as catalyst for DNA hydrolysis.

Authors:  Hitoshi Katada; Hidetake Seino; Yasushi Mizobe; Jun Sumaoka; Makoto Komiyama
Journal:  J Biol Inorg Chem       Date:  2007-11-07       Impact factor: 3.358

3.  New macrocyclic terbium(III) complex for use in RNA footprinting experiments.

Authors:  Matthew J Belousoff; Phuc Ung; Craig M Forsyth; Yitzhak Tor; Leone Spiccia; Bim Graham
Journal:  J Am Chem Soc       Date:  2009-01-28       Impact factor: 15.419

4.  Chemical modification of Ce(IV)/EDTA-based artificial restriction DNA cutter for versatile manipulation of double-stranded DNA.

Authors:  Yoji Yamamoto; Masao Mori; Yuichiro Aiba; Takafumi Tomita; Wen Chen; Jing-Min Zhou; Akihiko Uehara; Yi Ren; Yoshihito Kitamura; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2007-03-21       Impact factor: 16.971

Review 5.  Applications of PNA-Based Artificial Restriction DNA Cutters.

Authors:  Narumi Shigi; Jun Sumaoka; Makoto Komiyama
Journal:  Molecules       Date:  2017-09-21       Impact factor: 4.411

6.  Cut-and-Paste of DNA Using an Artificial Restriction DNA Cutter.

Authors:  Makoto Komiyama
Journal:  Int J Mol Sci       Date:  2013-02-05       Impact factor: 5.923

7.  Chiral introduction of positive charges to PNA for double-duplex invasion to versatile sequences.

Authors:  Takumi Ishizuka; Junya Yoshida; Yoji Yamamoto; Jun Sumaoka; Tullia Tedeschi; Roberto Corradini; Stefano Sforza; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2008-01-18       Impact factor: 16.971

  7 in total

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