Literature DB >> 16485136

Polymorphisms in DNA double-strand break repair genes and risk of breast cancer: two population-based studies in USA and Poland, and meta-analyses.

Montserrat García-Closas1, Kathleen M Egan, Polly A Newcomb, Louise A Brinton, Linda Titus-Ernstoff, Stephen Chanock, Robert Welch, Jolanta Lissowska, Beata Peplonska, Neonila Szeszenia-Dabrowska, Witold Zatonski, Alicja Bardin-Mikolajczak, Jeffery P Struewing.   

Abstract

The double-strand break DNA repair pathway has been implicated in breast carcinogenesis. We evaluated the association between 19 polymorphisms in seven genes in this pathway (XRCC2, XRCC3, BRCA2, ZNF350, BRIP1, XRCC4, LIG4) and breast cancer risk in two population-based studies in USA (3,368 cases and 2,880 controls) and Poland (1,995 cases and 2,296 controls). These data suggested weak associations with breast cancer risk for XRCC3 T241M and IVS7-14A>G (pooled odds ratio (95% confidence interval): 1.18 (1.04-1.34) and 0.85 (0.73-0.98) for homozygous variant vs wild-type genotypes, respectively), and for an uncommon variant in ZNF350 S472P (1.24 (1.05-1.48)), with no evidence for study heterogeneity. The remaining variants examined had no significant relationships to breast cancer risk. Meta-analyses of studies in Caucasian populations, including ours, provided some support for a weak association for homozygous variants for XRCC3 T241M (1.16 (1.04-1.30); total of 10,979 cases and 10,423 controls) and BRCA2 N372H (1.13 (1.10-1.28); total of 13,032 cases and 13,314 controls), and no support for XRCC2 R188H (1.06 (0.59-1.91); total of 8,394 cases and 8,404 controls). In conclusion, the genetic variants evaluated are unlikely to have a substantial overall association with breast cancer risk; however, weak associations are possible for XRCC3 (T241M and IVS7-14A>G), BRCA2 N372H, and ZNF350 S472P. Evaluation of potential underlying gene-gene interactions or associations in population subgroups will require even larger sample sizes.

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Year:  2006        PMID: 16485136     DOI: 10.1007/s00439-006-0135-z

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  28 in total

Review 1.  Chromosomal stability and the DNA double-stranded break connection.

Authors:  D C van Gent; J H Hoeijmakers; R Kanaar
Journal:  Nat Rev Genet       Date:  2001-03       Impact factor: 53.242

2.  A common variant in BRCA2 is associated with both breast cancer risk and prenatal viability.

Authors:  C S Healey; A M Dunning; M D Teare; D Chase; L Parker; J Burn; J Chang-Claude; A Mannermaa; V Kataja; D G Huntsman; P D Pharoah; R N Luben; D F Easton; B A Ponder
Journal:  Nat Genet       Date:  2000-11       Impact factor: 38.330

3.  HapScope: a software system for automated and visual analysis of functionally annotated haplotypes.

Authors:  Jinghui Zhang; William L Rowe; Jeffery P Struewing; Kenneth H Buetow
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

4.  Polymorphisms in DNA double-strand break repair genes and breast cancer risk in the Nurses' Health Study.

Authors:  Jiali Han; Susan E Hankinson; Hardeep Ranu; Immaculata De Vivo; David J Hunter
Journal:  Carcinogenesis       Date:  2003-10-24       Impact factor: 4.944

5.  No association between BRCA2 N372H and breast cancer risk.

Authors:  David G Cox; Susan E Hankinson; David J Hunter
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2005-05       Impact factor: 4.254

6.  Operating characteristics of a rank correlation test for publication bias.

Authors:  C B Begg; M Mazumdar
Journal:  Biometrics       Date:  1994-12       Impact factor: 2.571

7.  Double-strand break repair gene polymorphisms and risk of breast or ovarian cancer.

Authors:  Penelope M Webb; John L Hopper; Beth Newman; Xiaoqing Chen; Livia Kelemen; Graham G Giles; Melissa C Southey; Georgia Chenevix-Trench; Amanda B Spurdle
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2005-02       Impact factor: 4.254

8.  SNP500Cancer: a public resource for sequence validation and assay development for genetic variation in candidate genes.

Authors:  Bernice R Packer; Meredith Yeager; Brian Staats; Robert Welch; Andrew Crenshaw; Maureen Kiley; Andrew Eckert; Michael Beerman; Edward Miller; Andrew Bergen; Nathaniel Rothman; Robert Strausberg; Stephen J Chanock
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

9.  Common variation in BRCA2 and breast cancer risk: a haplotype-based analysis in the Multiethnic Cohort.

Authors:  Matthew L Freedman; Kathryn L Penney; Daniel O Stram; Loïc Le Marchand; Joel N Hirschhorn; Laurence N Kolonel; David Altshuler; Brian E Henderson; Christopher A Haiman
Journal:  Hum Mol Genet       Date:  2004-08-18       Impact factor: 6.150

10.  A potential role for the XRCC2 R188H polymorphic site in DNA-damage repair and breast cancer.

Authors:  Saeed Rafii; Paul O'Regan; George Xinarianos; Iman Azmy; Tim Stephenson; Malcolm Reed; Mark Meuth; John Thacker; Angela Cox
Journal:  Hum Mol Genet       Date:  2002-06-01       Impact factor: 6.150

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  61 in total

1.  Association between the XRCC3 polymorphisms and breast cancer risk: meta-analysis based on case-control studies.

Authors:  Xiao-Feng He; Wu Wei; Jiao Su; Zi-Xuan Yang; Yi Liu; Ying Zhang; Da-Peng Ding; Wei Wang
Journal:  Mol Biol Rep       Date:  2011-12-10       Impact factor: 2.316

2.  Performance of common genetic variants in breast-cancer risk models.

Authors:  Sholom Wacholder; Patricia Hartge; Ross Prentice; Montserrat Garcia-Closas; Heather Spencer Feigelson; W Ryan Diver; Michael J Thun; David G Cox; Susan E Hankinson; Peter Kraft; Bernard Rosner; Christine D Berg; Louise A Brinton; Jolanta Lissowska; Mark E Sherman; Rowan Chlebowski; Charles Kooperberg; Rebecca D Jackson; Dennis W Buckman; Peter Hui; Ruth Pfeiffer; Kevin B Jacobs; Gilles D Thomas; Robert N Hoover; Mitchell H Gail; Stephen J Chanock; David J Hunter
Journal:  N Engl J Med       Date:  2010-03-18       Impact factor: 91.245

3.  Lack of an association between XRCC2 R188H polymorphisms and breast cancer: an update meta-analysis involving 35,422 subjects.

Authors:  Bin Kong; Zhi-Dong Lv; Li Chen; Ruo-Wu Shen; Li-Ying Jin; Zhao-Chuan Yang
Journal:  Int J Clin Exp Med       Date:  2015-09-15

4.  Breast cancer susceptibility associated with rs1219648 (fibroblast growth factor receptor 2) and postmenopausal hormone therapy use in a population-based United States study.

Authors:  Shaneda Warren Andersen; Amy Trentham-Dietz; Jonine D Figueroa; Linda J Titus; Qiuyin Cai; Jirong Long; John M Hampton; Kathleen M Egan; Polly A Newcomb
Journal:  Menopause       Date:  2013-03       Impact factor: 2.953

5.  Association of LIG4 and XRCC4 gene polymorphisms with the risk of human glioma in a Chinese population.

Authors:  Youle Su; Songtao Qi; Changwu Dou; Lian Shuang; Haicheng Yan
Journal:  Int J Clin Exp Pathol       Date:  2015-02-01

6.  Germline variation in TP53 regulatory network genes associates with breast cancer survival and treatment outcome.

Authors:  Maral Jamshidi; Marjanka K Schmidt; Thilo Dörk; Montserrat Garcia-Closas; Tuomas Heikkinen; Sten Cornelissen; Alexandra J van den Broek; Peter Schürmann; Andreas Meyer; Tjoung-Won Park-Simon; Jonine Figueroa; Mark Sherman; Jolanta Lissowska; Garrett Teoh Hor Keong; Astrid Irwanto; Marko Laakso; Sampsa Hautaniemi; Kristiina Aittomäki; Carl Blomqvist; Jianjun Liu; Heli Nevanlinna
Journal:  Int J Cancer       Date:  2012-10-25       Impact factor: 7.396

7.  Association of CYP1B1 haplotypes and breast cancer risk in Caucasian women.

Authors:  Yifan Huang; Amy Trentham-Dietz; Montserrat García-Closas; Polly A Newcomb; Linda Titus-Ernstoff; John M Hampton; Stephen J Chanock; Jonathan L Haines; Kathleen M Egan
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2009-03-17       Impact factor: 4.254

8.  Subtyping of breast cancer by immunohistochemistry to investigate a relationship between subtype and short and long term survival: a collaborative analysis of data for 10,159 cases from 12 studies.

Authors:  Fiona M Blows; Kristy E Driver; Marjanka K Schmidt; Annegien Broeks; Flora E van Leeuwen; Jelle Wesseling; Maggie C Cheang; Karen Gelmon; Torsten O Nielsen; Carl Blomqvist; Päivi Heikkilä; Tuomas Heikkinen; Heli Nevanlinna; Lars A Akslen; Louis R Bégin; William D Foulkes; Fergus J Couch; Xianshu Wang; Vicky Cafourek; Janet E Olson; Laura Baglietto; Graham G Giles; Gianluca Severi; Catriona A McLean; Melissa C Southey; Emad Rakha; Andrew R Green; Ian O Ellis; Mark E Sherman; Jolanta Lissowska; William F Anderson; Angela Cox; Simon S Cross; Malcolm W R Reed; Elena Provenzano; Sarah-Jane Dawson; Alison M Dunning; Manjeet Humphreys; Douglas F Easton; Montserrat García-Closas; Carlos Caldas; Paul D Pharoah; David Huntsman
Journal:  PLoS Med       Date:  2010-05-25       Impact factor: 11.069

9.  Assessing Candidate Gene nsSNPs for Phenotypic Differences in Double-Strand Break Repair Using Radiation-Induced gammaH2A.X Foci.

Authors:  Christina A Markunas; David M Umbach; Zongli Xu; Jack A Taylor
Journal:  J Cancer Epidemiol       Date:  2009-03-12

10.  Absence of truncating BRIP1 mutations in chromosome 17q-linked hereditary prostate cancer families.

Authors:  A M Ray; K A Zuhlke; G R Johnson; A M Levin; J A Douglas; E M Lange; K A Cooney
Journal:  Br J Cancer       Date:  2009-11-24       Impact factor: 7.640

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