Literature DB >> 16483820

Molecular characterization of the rpoB gene in Brucella species: new potential molecular markers for genotyping.

Cinzia Marianelli1, Franco Ciuchini, Michela Tarantino, Paolo Pasquali, Rosanna Adone.   

Abstract

The rpoB gene encoding the beta subunit of the DNA-dependent RNA polymerase was molecularly characterized by PCR amplification and DNA sequencing in 26 Brucella reference strains by using primers selected according to the B. melitensis 16 M rpoB published sequence. Comparison of the rpoB nucleotide sequence of all Brucella strains analysed revealed specific nucleotide variations associated with different Brucella species and biovars. 17 rpoB alleles were recognized and new Brucella typing is proposed. Our results suggest that the rpoB gene polymorphism can be used to identify all Brucella species and most of the biovars, offering an improvement over conventional typing methods.

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Year:  2006        PMID: 16483820     DOI: 10.1016/j.micinf.2005.10.008

Source DB:  PubMed          Journal:  Microbes Infect        ISSN: 1286-4579            Impact factor:   2.700


  26 in total

1.  Real-time PCR assays of single-nucleotide polymorphisms defining the major Brucella clades.

Authors:  Jeffrey T Foster; Richard T Okinaka; Rita Svensson; Kathryn Shaw; Barun K De; Richard A Robison; William S Probert; Leo J Kenefic; William D Brown; Paul Keim
Journal:  J Clin Microbiol       Date:  2007-11-21       Impact factor: 5.948

2.  Analysis of RNA polymerase beta subunit (rpoB) gene sequences for the discriminative power of marine Vibrio species.

Authors:  Jang-Seu Ki; Rui Zhang; Wen Zhang; Yi-Li Huang; Pei-Yuan Qian
Journal:  Microb Ecol       Date:  2009-05-07       Impact factor: 4.552

3.  Emergence of a clonal lineage of Brucella abortus biovar 3 in clinical cases in Spain.

Authors:  Sylvia Valdezate; Ana Navarro; Virginia Rubio; Bruno Garin-Bastuji; David Albert; Purificación Hernandez; Pilar M Alonso; Juan A Saéz-Nieto
Journal:  J Clin Microbiol       Date:  2009-06-24       Impact factor: 5.948

4.  Nucleotide polymorphism-based single-tube test for robust molecular identification of all currently described Brucella species.

Authors:  Pierre Wattiau; Adrian M Whatmore; Mieke Van Hessche; Jacques Godfroid; David Fretin
Journal:  Appl Environ Microbiol       Date:  2011-07-29       Impact factor: 4.792

5.  Molecular serotyping of Salmonella enterica by complete rpoB gene sequencing.

Authors:  Won-Jin Seong; Hyuk-Joon Kwon; Tae-Eun Kim; Deog-Yong Lee; Mi-Sun Park; Jae-Hong Kim
Journal:  J Microbiol       Date:  2012-12-30       Impact factor: 3.422

6.  Epidemiological and phylogenetic analysis of Spanish human Brucella melitensis strains by multiple-locus variable-number tandem-repeat typing, hypervariable octameric oligonucleotide fingerprinting, and rpoB typing.

Authors:  Sylvia Valdezate; Ana Navarro; Pilar Villalón; Gema Carrasco; Juan A Saéz-Nieto
Journal:  J Clin Microbiol       Date:  2010-06-16       Impact factor: 5.948

7.  Examination of taxonomic uncertainties surrounding Brucella abortus bv. 7 by phenotypic and molecular approaches.

Authors:  Bruno Garin-Bastuji; Virginie Mick; Gilles Le Carrou; Sebastien Allix; Lorraine L Perrett; Claire E Dawson; Pauline Groussaud; Emma J Stubberfield; Mark Koylass; Adrian M Whatmore
Journal:  Appl Environ Microbiol       Date:  2013-12-20       Impact factor: 4.792

8.  Whole-genome-based phylogeny and divergence of the genus Brucella.

Authors:  Jeffrey T Foster; Stephen M Beckstrom-Sternberg; Talima Pearson; James S Beckstrom-Sternberg; Patrick S G Chain; Francisco F Roberto; Jonathan Hnath; Tom Brettin; Paul Keim
Journal:  J Bacteriol       Date:  2009-02-06       Impact factor: 3.490

9.  Comparison of two multiple-locus variable-number tandem-repeat analysis methods for molecular strain typing of human Brucella melitensis isolates from the Middle East.

Authors:  Rebekah V Tiller; Barun K De; Marie Boshra; Lynn Y Huynh; Matthew N Van Ert; David M Wagner; John Klena; T S Mohsen; S S El-Shafie; Paul Keim; Alex R Hoffmaster; Patricia P Wilkins; Guillermo Pimentel
Journal:  J Clin Microbiol       Date:  2009-05-13       Impact factor: 5.948

10.  Multilocus variable number tandem repeat analysis (MLVA)-typing of Brucella abortus isolates of India reveals limited genetic diversity.

Authors:  Maninder Singh; Mohd Ashraf Malik; Dhirender Kumar Singh; Soni Doimari; Rohini Sharma
Journal:  Trop Anim Health Prod       Date:  2019-11-11       Impact factor: 1.559

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