Literature DB >> 16482346

The enzymatic activation of coenzyme B12.

Kenneth L Brown1.   

Abstract

The enzymatic "activation" of coenzyme B12 (5'-deoxyadenosylcobalamin, AdoCbl), in which homolysis of the carbon-cobalt bond of the coenzyme is catalyzed by some 10(9)- to 10(14)-fold, remains one of the outstanding problems in bioinorganic chemistry. Mechanisms which feature the enzymatic manipulation of the axial Co-N bond length have been investigated by theoretical and experimental methods. Classical mechanochemical triggering, in which steric compression of the long axial Co-N bond leads to increased upward folding of the corrin ring and stretching of the Co-C bond is found to be feasible by molecular modeling, but the strain induced in the Co-C bond seems to be too small to account for the observed catalytic power. The modeling study shows that the effect is a steric one which depends on the size of the axial nucleotide base, as substitution of imidazole (Im) for the normal 5,6-dimethylbenzimidazole (Bzm) axial base decreases the Co-C bond labilization considerably. An experimental test was thus devised using the coenzyme analog with Im in place of Bzm (Ado(Im)Cbl). Studies of the enzymatic activation of this analog by the B12-dependent ribonucleoside triphosphate reductase from Lactobacillus leichmannii coupled with studies of the non-enzymatic homolytic lability of the Co-C bond of Ado(Im)Cbl show that the enzyme is only slightly less efficient (3.8-fold, 0.8 kcal mol(-1)) at activating Ado(Im)Cbl than at activating AdoCbl itself. This suggests, in agreement with the modeling study, that mechanochemical triggering can make only a small contribution to the enzymatic activation of AdoCbl. Another possibility, electronic stabilization of the Co(II) homolysis product by compression of the axial Co-N bond, requires that enzymatic activation be sensitive to the basicity of the axial nucleotide. Preliminary studies of the enzymatic activation of a coenzyme analog with a 5-fluoroimidazole axial nucleotide suggest that the catalysis of Co-C bond homolysis may indeed be significantly slowed by the decrease in basicity.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16482346     DOI: 10.1039/b517599m

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  9 in total

1.  Entropic origin of cobalt-carbon bond cleavage catalysis in adenosylcobalamin-dependent ethanolamine ammonia-lyase.

Authors:  Miao Wang; Kurt Warncke
Journal:  J Am Chem Soc       Date:  2013-10-01       Impact factor: 15.419

2.  Gold-containing indoles as anticancer agents that potentiate the cytotoxic effects of ionizing radiation.

Authors:  Sandra Craig; Lei Gao; Irene Lee; Thomas Gray; Anthony J Berdis
Journal:  J Med Chem       Date:  2012-02-15       Impact factor: 7.446

3.  NMR observations of 13C-enriched coenzyme B12 bound to the ribonucleotide reductase from Lactobacillus leichmannii.

Authors:  Kenneth L Brown; Jing Li; Xiang Zou
Journal:  Inorg Chem       Date:  2006-11-13       Impact factor: 5.165

4.  Proteome of Salmonella Enterica Serotype Typhimurium Grown in a Low Mg/pH Medium.

Authors:  Liang Shi; Charles Ansong; Heather Smallwood; Leah Rommereim; Jason E McDermott; Heather M Brewer; Angela D Norbeck; Ronald C Taylor; Jean K Gustin; Fred Heffron; Richard D Smith; Joshua N Adkins
Journal:  J Proteomics Bioinform       Date:  2009

5.  Vitamin B(12) and alpha-Ribonucleosides.

Authors:  Tilak Chandra; Kenneth L Brown
Journal:  Tetrahedron       Date:  2008-01-01       Impact factor: 2.457

6.  Butyl-bis-(diphenyl-glyoximato)(pyridine-κN)-cobalt(III).

Authors:  Sarvendra Kumar; Suresh Thapa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-07

7.  4-[(4'-Chloro-methyl-[1,1'-biphen-yl]-4-yl)meth-yl]bis-(dimethyl-glyoximato-κN,N')(pyridine-κN)cobalt(III).

Authors:  Sarvendra Kumar; Suresh Thapa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-14

8.  Modulating the cobalt redox potential through imidazole hydrogen bonding interactions in a supramolecular biomimetic protein-cofactor model.

Authors:  Marjorie Sonnay; Thomas Fox; Olivier Blacque; Felix Zelder
Journal:  Chem Sci       Date:  2016-02-23       Impact factor: 9.825

9.  Cofactor Selectivity in Methylmalonyl Coenzyme A Mutase, a Model Cobamide-Dependent Enzyme.

Authors:  Olga M Sokolovskaya; Kenny C Mok; Jong Duk Park; Jennifer L A Tran; Kathryn A Quanstrom; Michiko E Taga
Journal:  mBio       Date:  2019-09-24       Impact factor: 7.867

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.