Literature DB >> 16479497

Pulling forces acting on Hox gene clusters cause expression collinearity.

Spyros Papageorgiou1.   

Abstract

The development of normal patterns along the primary and secondary vertebrate axes depends on the regularity of early Hox gene expression. During initial stages, these expression events form a sequential pattern of partially overlapping domains along the anteroposterior axis in coincidence with the 3' to 5' order of the genes in the Hox cluster (spatial collinearity). In addition, the genes are activated one after the other in the 3' to 5'order (temporal collinearity). These features are poorly understood within the framework of Molecular Genetics. A model was proposed according to which physical forces act on Hox clusters as a result of signaling from morphogen gradients. The model can explain the collinearity of Hox gene expression along the primary and secondary body axes. The increase in the concentration of morphogen is accordingly followed by an increase of the force acting on the cluster. The genes are sequentially translocated, in the 3' to 5' order, toward the interchromosome domain where they are exposed to transcription factors for activation. The above geometrodynamic approach reproduces most collinearity data. Recent experiments verify the above prediction of sequential 3' to 5' Hox gene translocations in the interchromosome domain. Furthermore, it seems that these translocations, combined with cluster decondensations, are caused by attractive forces acting on the 3' end of the cluster and pulling the genes out of the chromosome territory. Additional experiments are proposed in order to specify the origin of the forces.

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Year:  2006        PMID: 16479497     DOI: 10.1387/ijdb.052034sp

Source DB:  PubMed          Journal:  Int J Dev Biol        ISSN: 0214-6282            Impact factor:   2.203


  9 in total

1.  Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states.

Authors:  Pierre J Fabre; Alexander Benke; Elisabeth Joye; Thi Hanh Nguyen Huynh; Suliana Manley; Denis Duboule
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

2.  Physical Forces May Cause the HoxD Gene Cluster Elongation.

Authors:  Spyros Papageorgiou
Journal:  Biology (Basel)       Date:  2017-06-23

3.  Hox Gene Collinearity: From A-P Patterning to Radially Symmetric Animals.

Authors:  Spyros Papageorgiou
Journal:  Curr Genomics       Date:  2015-10       Impact factor: 2.236

4.  Abnormal Elongations of HOX Gene Clusters May Cause Cancer.

Authors:  Spyros Papageorgiou
Journal:  Front Cell Dev Biol       Date:  2018-03-12

5.  Sequential in cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster.

Authors:  Ana Rita Amândio; Leonardo Beccari; Lucille Lopez-Delisle; Bénédicte Mascrez; Jozsef Zakany; Sandra Gitto; Denis Duboule
Journal:  Genes Dev       Date:  2021-10-28       Impact factor: 11.361

Review 6.  Physical Laws Shape Up HOX Gene Collinearity.

Authors:  Spyros Papageorgiou
Journal:  J Dev Biol       Date:  2021-05-06

7.  Comparison of models for the collinearity of hox genes in the developmental axes of vertebrates.

Authors:  Spyros Papageorgiou
Journal:  Curr Genomics       Date:  2012-05       Impact factor: 2.236

8.  A biophysical mechanism may control the collinearity of Hoxd genes during the early phase of limb development.

Authors:  Spyros Papageorgiou
Journal:  Hum Genomics       Date:  2009-04       Impact factor: 4.639

9.  Evolutionary constraints favor a biophysical model explaining hox gene collinearity.

Authors:  Yannis Almirantis; Astero Provata; Spyros Papageorgiou
Journal:  Curr Genomics       Date:  2013-06       Impact factor: 2.236

  9 in total

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