Literature DB >> 16474978

Molecular evolution and functionally important structures of molluscan Dermatopontin: implications for the origins of molluscan shell matrix proteins.

Isao Sarashina1, Haruyo Yamaguchi, Takuma Haga, Minoru Iijima, Satoshi Chiba, Kazuyoshi Endo.   

Abstract

A major shell matrix protein originally obtained from a freshwater snail is a molluscan homologue of Dermatopontins, a group of Metazoan proteins also called TRAMP (tyrosine-rich acidic matrix protein). We sequenced and identified 14 molluscan homologues of Dermatopontin from eight snail species belonging to the order Basommatophora and Stylommatophora. The bassommatophoran Dermatopontins fell into three types, one is suggested to be a shell matrix protein and the others are proteins having more general functions based on gene expression analyses. N-glycosylation is inferred to be important for the function involved in shell calcification, because potential N-glycosylation sites were found exclusively in the Dermatopontins considered as shell matrix proteins. The stylommatophoran Dermatopontins fell into two types, also suggested to comprise a shell matrix protein and a protein having a more general function. Phylogenetic analyses using maximum likelihood and Bayesian methods revealed that gene duplication events occurred independently in both basommatophoran and stylommatophoran lineages. These results suggest that the dermatopontin genes were co-opted for molluscan calcification at least twice independently after the divergence of basommatophoran and stylommatophoran lineages, or more recently than we have expected.

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Year:  2006        PMID: 16474978     DOI: 10.1007/s00239-005-0095-2

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  39 in total

1.  A new matrix protein family related to the nacreous layer formation of Pinctada fucata.

Authors:  T Samata; N Hayashi; M Kono; K Hasegawa; C Horita; S Akera
Journal:  FEBS Lett       Date:  1999-11-26       Impact factor: 4.124

2.  The amino acid sequence of ovocleidin 17, a major protein of the avian eggshell calcified layer.

Authors:  K Mann; F Siedler
Journal:  Biochem Mol Biol Int       Date:  1999-06

3.  Complementary DNA Cloning and Characterization of Pearlin, a New Class of Matrix Protein in the Nacreous Layer of Oyster Pearls.

Authors:  T Miyashita; R Takagi; M Okushima; S Nakano; H Miyamoto; E Nishikawa; A Matsushiro
Journal:  Mar Biotechnol (NY)       Date:  2000-09       Impact factor: 3.619

4.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

5.  Perlustrin, a Haliotis laevigata (abalone) nacre protein, is homologous to the insulin-like growth factor binding protein N-terminal module of vertebrates.

Authors:  I M Weiss; W Göhring; M Fritz; K Mann
Journal:  Biochem Biophys Res Commun       Date:  2001-07-13       Impact factor: 3.575

6.  Mucins and molluscan calcification. Molecular characterization of mucoperlin, a novel mucin-like protein from the nacreous shell layer of the fan mussel Pinna nobilis (Bivalvia, pteriomorphia).

Authors:  F Marin; P Corstjens; B de Gaulejac; E de Vrind-De Jong; P Westbroek
Journal:  J Biol Chem       Date:  2000-07-07       Impact factor: 5.157

7.  A novel matrix protein participating in the nacre framework formation of pearl oyster, Pinctada fucata.

Authors:  Yong Zhang; Liping Xie; Qingxiong Meng; Tiemin Jiang; Ruolei Pu; Lei Chen; Rongqing Zhang
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2003-07       Impact factor: 2.231

8.  Ostrich (Struthio camelus) eggshell matrix contains two different C-type lectin-like proteins. Isolation, amino acid sequence, and posttranslational modifications.

Authors:  Karlheinz Mann; Frank Siedler
Journal:  Biochim Biophys Acta       Date:  2004-01-14

Review 9.  Protein-X, Pancreatic Stone-, Pancreatic thread-, reg-protein, P19, lithostathine, and now what? Characterization, structural analysis and putative function(s) of the major non-enzymatic protein of pancreatic secretions.

Authors:  M De Reggi; B Gharib
Journal:  Curr Protein Pept Sci       Date:  2001-03       Impact factor: 3.272

10.  Characterization of two molluscan crystal-modulating biomineralization proteins and identification of putative mineral binding domains.

Authors:  Martina Michenfelder; Germaine Fu; Camille Lawrence; James C Weaver; Brandon A Wustman; Laura Taranto; John Spencer Evans; Daniel E Morse
Journal:  Biopolymers       Date:  2003-12       Impact factor: 2.505

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  18 in total

1.  Identification of genes potentially related to biomineralization and immunity by transcriptome analysis of pearl sac in pearl oyster Pinctada martensii.

Authors:  Xiaoxia Zhao; Qingheng Wang; Yu Jiao; Ronglian Huang; Yuewen Deng; Huan Wang; Xiaodong Du
Journal:  Mar Biotechnol (NY)       Date:  2012-02-16       Impact factor: 3.619

2.  The molecular evolution of the pif family proteins in various species of mollusks.

Authors:  Michio Suzuki; Ai Iwashima; Mariko Kimura; Toshihiro Kogure; Hiromichi Nagasawa
Journal:  Mar Biotechnol (NY)       Date:  2012-07-31       Impact factor: 3.619

3.  An irradiated marrow niche reveals a small noncollagenous protein mediator of homing, dermatopontin.

Authors:  Ashley C Kramer; Yuliana Astuti; Alexis Elfstrum; Michael J Lehrke; Jakub Tolar; Bruce R Blazar; Amanda L Blake; Mandy E Taisto; Justin W Furcich; Erin E Nolan; Wilaiwan W Durose; Beau R Webber; Athena Geisness; David K Wood; Troy C Lund
Journal:  Blood Adv       Date:  2021-09-28

4.  Evolution of Epidermal Growth Factor (EGF)-like and Zona Pellucida Domains Containing Shell Matrix Proteins in Mollusks.

Authors:  Keisuke Shimizu; Takeshi Takeuchi; Lumi Negishi; Hitoshi Kurumizaka; Isao Kuriyama; Kazuyoshi Endo; Michio Suzuki
Journal:  Mol Biol Evol       Date:  2022-07-02       Impact factor: 8.800

5.  Expression patterns of engrailed and dpp in the gastropod Lymnaea stagnalis.

Authors:  Minoru Iijima; Takeshi Takeuchi; Isao Sarashina; Kazuyoshi Endo
Journal:  Dev Genes Evol       Date:  2008-04-29       Impact factor: 0.900

6.  Identification and comparison of amorphous calcium carbonate-binding protein and acetylcholine-binding protein in the abalone, Haliotis discus hannai.

Authors:  Jing Huang; Hongzhong Wang; Yu Cui; Guiyou Zhang; Guilan Zheng; Shiting Liu; Liping Xie; Rongqing Zhang
Journal:  Mar Biotechnol (NY)       Date:  2009-01-13       Impact factor: 3.619

7.  Analysis of a deep transcriptome from the mantle tissue of Patella vulgata Linnaeus (Mollusca: Gastropoda: Patellidae) reveals candidate biomineralising genes.

Authors:  Gijsbert D A Werner; Patrick Gemmell; Stefanie Grosser; Rebecca Hamer; Sebastian M Shimeld
Journal:  Mar Biotechnol (NY)       Date:  2012-08-03       Impact factor: 3.619

8.  In-depth proteomic analysis of a mollusc shell: acid-soluble and acid-insoluble matrix of the limpet Lottia gigantea.

Authors:  Karlheinz Mann; Eric Edsinger-Gonzales; Matthias Mann
Journal:  Proteome Sci       Date:  2012-06-13       Impact factor: 2.480

9.  Characterization of the pigmented shell-forming proteome of the common grove snail Cepaea nemoralis.

Authors:  Karlheinz Mann; Daniel John Jackson
Journal:  BMC Genomics       Date:  2014-03-31       Impact factor: 3.969

10.  Left-right asymmetric expression of dpp in the mantle of gastropods correlates with asymmetric shell coiling.

Authors:  Keisuke Shimizu; Minoru Iijima; Davin He Setiamarga; Isao Sarashina; Tetsuhiro Kudoh; Takahiro Asami; Edi Gittenberger; Kazuyoshi Endo
Journal:  Evodevo       Date:  2013-05-28       Impact factor: 2.250

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