Literature DB >> 16474163

Human herpesvirus 1 UL24 gene encodes a potential PD-(D/E)XK endonuclease.

Lukasz Knizewski1, Lisa Kinch, Nick V Grishin, Leszek Rychlewski, Krzysztof Ginalski.   

Abstract

Using Meta-BASIC, a highly sensitive method for detection of distant similarity between proteins, we have identified another potential PD-(D/E)XK endonuclease in human herpesvirus 1 (HHV-1) encoded by the UL24 gene. The universal presence of UL24 in completed herpesviral genomes of three major subfamilies, Alphaherpesvirinae, Betaherpesvirinae, and Gammaherpesvirinae, suggests a fundamental role for this predicted PD-(D/E)XK endonuclease activity in the viral life cycle.

Entities:  

Mesh：

Substances：

Year:  2006        PMID： 16474163      PMCID： PMC1395385          DOI： 10.1128/JVI.80.5.2575-2577.2006

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  26 in total

Review 1.  The X philes: structure-specific endonucleases that resolve Holliday junctions.

Authors:  G J Sharples
Journal:  Mol Microbiol       Date:  2001-02       Impact factor: 3.501

2.  Grouping together highly diverged PD-(D/E)XK nucleases and identification of novel superfamily members using structure-guided alignment of sequence profiles.

Authors:  J M Bujnicki; L Rychlewski
Journal:  J Mol Microbiol Biotechnol       Date:  2001-01

Review 3.  Cooperation and competition in mismatch repair: very short-patch repair and methyl-directed mismatch repair in Escherichia coli.

Authors:  Ashok S Bhagwat; Margaret Lieb
Journal:  Mol Microbiol       Date:  2002-06       Impact factor: 3.501

4.  Identification, localization, and regulation of expression of the UL24 protein of herpes simplex virus type 1.

Authors:  Angela Pearson; Donald M Coen
Journal:  J Virol       Date:  2002-11       Impact factor: 5.103

Review 5.  Fundamental and accessory systems in herpesviruses.

Authors:  Andrew J Davison; Derrick J Dargan; Nigel D Stow
Journal:  Antiviral Res       Date:  2002-10       Impact factor: 5.970

6.  Identification and characterization of the UL24 gene product of herpes simplex virus type 2.

Authors:  Z Hong-Yan; T Murata; F Goshima; H Takakuwa; T Koshizuka; Y Yamauchi; Y Nishiyama
Journal:  Virus Genes       Date:  2001-06       Impact factor: 2.332

7.  SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories.

Authors:  L Aravind; K S Makarova; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-09-15       Impact factor: 16.971

8.  DNA repair proteins affect the lifecycle of herpes simplex virus 1.

Authors:  Caroline E Lilley; Christian T Carson; Alysson R Muotri; Fred H Gage; Matthew D Weitzman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-11       Impact factor: 11.205

9.  The herpesvirus alkaline exonuclease belongs to the restriction endonuclease PD-(D/E)XK superfamily: insight from molecular modeling and phylogenetic analysis.

Authors:  J M Bujnicki; L Rychlewski
Journal:  Virus Genes       Date:  2001-03       Impact factor: 2.198

10.  Identification of novel restriction endonuclease-like fold families among hypothetical proteins.

Authors:  Lisa N Kinch; Krzysztof Ginalski; Leszek Rychlewski; Nick V Grishin
Journal:  Nucleic Acids Res       Date:  2005-06-22       Impact factor: 16.971
View more
  14 in total

1.  Human cytomegalovirus UL76 elicits novel aggresome formation via interaction with S5a of the ubiquitin proteasome system.

Authors:  Shin-Rung Lin; Meei Jyh Jiang; Hung-Hsueh Wang; Cheng-Hui Hu; Ming-Shan Hsu; Edward Hsi; Chang-Yih Duh; Shang-Kwei Wang
Journal:  J Virol       Date:  2013-08-21       Impact factor: 5.103

2.  Relocalization of upstream binding factor to viral replication compartments is UL24 independent and follows the onset of herpes simplex virus 1 DNA synthesis.

Authors:  Maria H Lymberopoulos; Angela Pearson
Journal:  J Virol       Date:  2010-02-10       Impact factor: 5.103

3.  The UL21 Tegument Protein of Herpes Simplex Virus 1 Is Differentially Required for the Syncytial Phenotype.

Authors:  Akua Sarfo; Jason Starkey; Erica Mellinger; Dan Zhang; Pooja Chadha; Jillian Carmichael; John W Wills
Journal:  J Virol       Date:  2017-10-13       Impact factor: 5.103

4.  Analysis of synonymous codon usage in the UL24 gene of duck enteritis virus.

Authors:  Renyong Jia; Anchun Cheng; Mingshu Wang; Hongyi Xin; Yufei Guo; Dekang Zhu; Xuefeng Qi; Lichan Zhao; Han Ge; Xiaoyue Chen
Journal:  Virus Genes       Date:  2008-10-29       Impact factor: 2.332

5.  Conserved residues in the UL24 protein of herpes simplex virus 1 are important for dispersal of the nucleolar protein nucleolin.

Authors:  Luc Bertrand; Gabriel André Leiva-Torres; Huda Hyjazie; Angela Pearson
Journal:  J Virol       Date:  2010-01       Impact factor: 5.103

6.  Synthesis and anti-HSV-1 evaluation of new 3H-benzo[b]pyrazolo[3,4-h]-1,6-naphthyridines and 3H-pyrido[2,3-b]pyrazolo[3,4-h]-1,6-naphthyridines.

Authors:  Alice Mr Bernardino; Alexandre R Azevedo; Luiz Cs Pinheiro; Júlio C Borges; Izabel Cp Paixão; Milene Mesquita; Thiago Ml Souza; Maurício S Dos Santos
Journal:  Org Med Chem Lett       Date:  2012-02-01

7.  Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily.

Authors:  Kamil Steczkiewicz; Anna Muszewska; Lukasz Knizewski; Leszek Rychlewski; Krzysztof Ginalski
Journal:  Nucleic Acids Res       Date:  2012-05-25       Impact factor: 16.971

8.  Human cytomegalovirus UL76 induces chromosome aberrations.

Authors:  Voon-Kwan Siew; Chang-Yih Duh; Shang-Kwei Wang
Journal:  J Biomed Sci       Date:  2009-11-25       Impact factor: 8.410

9.  Realm of PD-(D/E)XK nuclease superfamily revisited: detection of novel families with modified transitive meta profile searches.

Authors:  Lukasz Knizewski; Lisa N Kinch; Nick V Grishin; Leszek Rychlewski; Krzysztof Ginalski
Journal:  BMC Struct Biol       Date:  2007-06-20

10.  Human cytomegalovirus gene UL76 induces IL-8 expression through activation of the DNA damage response.

Authors:  Helena Costa; Rute Nascimento; John Sinclair; Robert Michael Evans Parkhouse
Journal:  PLoS Pathog       Date:  2013-09-12       Impact factor: 6.823
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.