Literature DB >> 16472942

Ohanin, a novel protein from king cobra venom: its cDNA and genomic organization.

Yuh Fen Pung1, Sanjeed Vijaya Kumar, Nandhakishore Rajagopalan, Bryan G Fry, Prakash P Kumar, R Manjunatha Kini.   

Abstract

Ohanin, from king cobra venom, is a novel protein which induces hypolocomotion and hyperalgesia in mice [Pung, Y.F., Wong, P.T.H., Kumar, P.P., Hodgson W.C., Kini, R.M., 2005. Ohanin, a novel protein from king cobra venom induces hypolocomotion and hyperalgesia in mice. J. Biol. Chem. 280, 13137-13147.]. It is weakly similar to PRY-SPRY domains (B30.2-like domain). Here we report the complete cDNA and genomic organization of ohanin. Interestingly, cDNA sequence does not show significant sequence similarity to any known sequences, including those of B30.2-like domain-containing proteins. Its full-length cDNA sequence of 1558 bp encodes for prepro-ohanin with a propeptide segment at the C-terminal. Ohanin is the first member of a new subfamily of proteins containing B30.2-like domain with short N-terminal segment. We named this subfamily as vespryns. There are two mRNA subtypes differing in their 5'-untranslated regions. Southern hybridization study shows that ohanin is encoded by a single gene. Its genomic sequence is 7086 bp with five exons and four introns, and the two types of mRNAs are generated by alternative splicing of exon 2. Our results indicate that ohanin and vespryns may have evolved from the same ancestral gene as B30.2 domain.

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Year:  2006        PMID: 16472942     DOI: 10.1016/j.gene.2005.12.002

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  12 in total

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Authors:  Dileep G Nair; Bryan G Fry; Paul Alewood; Prakash P Kumar; R Manjunatha Kini
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2.  Mapping Proteoforms and Protein Complexes From King Cobra Venom Using Both Denaturing and Native Top-down Proteomics.

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3.  Novel venom gene discovery in the platypus.

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4.  The venom-gland transcriptome of the eastern diamondback rattlesnake (Crotalus adamanteus).

Authors:  Darin R Rokyta; Alan R Lemmon; Mark J Margres; Karalyn Aronow
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5.  A transcriptomic analysis of gene expression in the venom gland of the snake Bothrops alternatus (urutu).

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6.  Venom-gland transcriptome and venom proteome of the Malaysian king cobra (Ophiophagus hannah).

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7.  Comparative venom gland transcriptomics of Naja kaouthia (monocled cobra) from Malaysia and Thailand: elucidating geographical venom variation and insights into sequence novelty.

Authors:  Kae Yi Tan; Choo Hock Tan; Lawan Chanhome; Nget Hong Tan
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8.  Exploring the Diversity and Novelty of Toxin Genes in Naja sumatrana, the Equatorial Spitting Cobra from Malaysia through De Novo Venom-Gland Transcriptomics.

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Journal:  Toxins (Basel)       Date:  2019-02-11       Impact factor: 4.546

9.  The genesis of an exceptionally lethal venom in the timber rattlesnake (Crotalus horridus) revealed through comparative venom-gland transcriptomics.

Authors:  Darin R Rokyta; Kenneth P Wray; Mark J Margres
Journal:  BMC Genomics       Date:  2013-06-12       Impact factor: 3.969

10.  Proteomic Characterization of Two Medically Important Malaysian Snake Venoms, Calloselasma rhodostoma (Malayan Pit Viper) and Ophiophagus hannah (King Cobra).

Authors:  Sugita Kunalan; Iekhsan Othman; Sharifah Syed Hassan; Wayne C Hodgson
Journal:  Toxins (Basel)       Date:  2018-10-26       Impact factor: 4.546

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