Literature DB >> 16471944

Geometric preferences in iron(II) and zinc(II) model complexes of peptide deformylase.

Vivek V Karambelkar1, Chuanyun Xiao, Yingkai Zhang, Amy A Narducci Sarjeant, David P Goldberg.   

Abstract

A combination of experimental and theoretical studies on (N,S(thiolate))M(II)-formate complexes (M = Fe, Zn) suggests a rationale for the metal ion dependence of peptide deformylase.

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Year:  2006        PMID： 16471944      PMCID： PMC2760226          DOI： 10.1021/ic050995s

Source DB:  PubMed          Journal:  Inorg Chem        ISSN： 0020-1669            Impact factor:   5.165


  12 in total

1.  Deformylase as a novel antibacterial target.

Authors:  Z Yuan; J Trias; R J. White
Journal:  Drug Discov Today       Date:  2001-09-15       Impact factor: 7.851

2.  Characterization of cobalt(II)-substituted peptide deformylase: function of the metal ion and the catalytic residue Glu-133.

Authors:  P T Rajagopalan; S Grimme; D Pei
Journal:  Biochemistry       Date:  2000-02-01       Impact factor: 3.162

3.  Mononuclear, dinuclear, and pentanuclear [[N,S(thiolate)]iron(II)] complexes: nuclearity control, incorporation of hydroxide bridging ligands, and magnetic behavior.

Authors:  Divya Krishnamurthy; Amy N Sarjeant; David P Goldberg; Andrea Caneschi; Federico Totti; Lev N Zakharov; Arnold L Rheingold
Journal:  Chemistry       Date:  2005-12-09       Impact factor: 5.236

4.  Phosphate triester hydrolysis promoted by an N2S(thiolate)Zn complex: mechanistic implications for the metal-dependent reactivity of peptide deformylase.

Authors:  David P Goldberg; Robert C diTargiani; Frances Namuswe; Ellen C Minnihan; SeChin Chang; Lev N Zakharov; Arnold L Rheingold
Journal:  Inorg Chem       Date:  2005-10-17       Impact factor: 5.165

5.  Crystal structure of type II peptide deformylase from Staphylococcus aureus.

Authors:  Eric T Baldwin; Melissa S Harris; Anthony W Yem; Cindy L Wolfe; Anne F Vosters; Kimberly A Curry; Robert W Murray; Jeffrey H Bock; Vincent P Marshall; Joyce I Cialdella; Mahesh H Merchant; Gil Choi; Martin R Deibel
Journal:  J Biol Chem       Date:  2002-06-04       Impact factor: 5.157

6.  Hydrolysis of 4-nitrophenyl acetate by a (N2S(thiolate))zinc hydroxide complex: a model of the catalytically active intermediate for the zinc form of peptide deformylase.

Authors:  Robert C diTargiani; SeChin Chang; Michael H Salter; Robert D Hancock; David P Goldberg
Journal:  Inorg Chem       Date:  2003-09-22       Impact factor: 5.165

7.  A model complex of a possible intermediate in the mechanism of action of peptide deformylase: first example of an (N2S)zinc(II)-formate complex.

Authors:  S C Chang; R D Sommer; A L Rheingold; D P Goldberg
Journal:  Chem Commun (Camb)       Date:  2001-11-21       Impact factor: 6.222

8.  Iron center, substrate recognition and mechanism of peptide deformylase.

Authors:  A Becker; I Schlichting; W Kabsch; D Groche; S Schultz; A F Wagner
Journal:  Nat Struct Biol       Date:  1998-12

9.  Isolation and crystallization of functionally competent Escherichia coli peptide deformylase forms containing either iron or nickel in the active site.

Authors:  D Groche; A Becker; I Schlichting; W Kabsch; S Schultz; A F Wagner
Journal:  Biochem Biophys Res Commun       Date:  1998-05-19       Impact factor: 3.575

10.  Control of peptide deformylase activity by metal cations.

Authors:  S Ragusa; S Blanquet; T Meinnel
Journal:  J Mol Biol       Date:  1998-07-17       Impact factor: 5.469
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  2 in total

Review 1.  Free energies of chemical reactions in solution and in enzymes with ab initio quantum mechanics/molecular mechanics methods.

Authors:  Hao Hu; Weitao Yang
Journal:  Annu Rev Phys Chem       Date:  2008       Impact factor: 12.703

2.  Identification of crucial amino acids of bacterial Peptide deformylases affecting enzymatic activity in response to oxidative stress.

Authors:  Sanjay Kumar; Pavitra Kanudia; Subramanian Karthikeyan; Pradip K Chakraborti
Journal:  J Bacteriol       Date:  2013-10-18       Impact factor: 3.490
  2 in total

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